Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3710 ATGATGCAAGGAAGCTTGAGAAATGCAAGTAAAGGTGGAAAATCTTCAAGCATAGATAGAAAGCTGGCATTGCAACAAGATGTAGATAGGTTGAAGAAGAAGCTTAAGCATGAGGAGAATATTCATAGGGCATTGGAGAGAGCTTTTAATAGACCTTTAGGAGCTTTACCTCGTCTTCCTCCTTATCTACCTCCATATATACTAACACTTCTGGCTGAAGTGGCCGTTTTGGAAGAGGAAATTGTTAGGCTTGAAGAGAAAGTTGTGTATATCAGGCAGGATTTGTATCAGGAAGCTGTCTACATATCATCTTCTAAGCCTAAATCGGAGCATTCGCCTCTTCCGAACAATTCAAACATATCAGTAACAACAATGGACAGTCCTAAATTGGATAAATTGAAGTCTCTTTCACAAACAGTTGATAATCCAGCTGCAACATCTACAACTAGGCCTACCATACCACTCCAAGAGAATAGACAAGGAAAAGAGAATAAATCCTGTACTAATTCTTTCAAGAAAAGGCTGCAACCCTCCAAACAAATGAGTAAAACTCCAATAAAAAATCTTCATGTTGACAATAAGTCATTGCATAAAAGGGCGCATTCTCCGAGAAGGAAGAAAGAACCAAGGGTAAAAGCTCCCCAAATGGCAGAACTAAGACATCCTAGTCCACACCAAATGTTACCAGAAGCTGACTGTCCAAATGTGATTTCTGAAAATATTCTAAAGTGCTTATCAAGTATTCTCTTGAGAATAAGTGCTGTGAAGAATCCAGGTTCTGCATGCGACATATCATCACCCTTATGGACTCAAAAGCCTCAAAACCATGTTGAAGGACCAGAGTTTTGGGATCCGTACGGTATCTGTCTAGAATTTGGAAAGAGGGATATTGGTCCCTACAAGCATTTATGTGCAATTGATGCTAAATCTTTCAATGCAAAACGAACCACAAGCACTTTGTTTTTACTGCACCGGTTGAAACTTCTGTTTAGGAAGCTAGCTTCTGTCAACTTGGAGAACCTCAACCATCAAGAGAAGCTTGCATTTTGGATCAACACCTATAACTCGTGTATGATGAATGCATTCGTAGAGAATGGCATACCGGAGAGTCCTGACATGGCTGTGGCAATGATGCGGAAGGCAAAAATAAATGTAGGCGGACACATACTAAGTGCAACAACCATAGAGCATTTCATTTTAAGACTCCCTTATCACTACAAATTTACATTTTCCAAGGGAGCGAAAAATCATGAAATGGTAGCAAGAAGCAAATATGGACTTGAACTGTCCGAACCCCTAGTGACATTTGCTCTCTCCTGTGGAACTTGGTCCTCTCCTGCTGTGAGAGTTTACACAGCATCCCAAGTGGAGAATGAACTAGAAGCTGCCAAAAGAGAGTACTTACAAGCAACAATTGGAATTTCAACATCCAAGTTTGCTATTCCAAAGCTTTTGGATTGGTATTTACAGAACTTTGCAAAAGACTTGGAATCATTGATGGATTGGATTTGCCTTCAATTACCAAGTGAATTAGGGAAAGAAGCTATTAAATTGCTTGAGAAAAGGAAAACTGAGCCCCTGTCACAATTTGTACAAATCATGCCATATGAGTTCAGCTTTAGATACTTGCTTTGCACATAA 1641 0.3967 MMQGSLRNASKGGKSSSIDRKLALQQDVDRLKKKLKHEENIHRALERAFNRPLGALPRLPPYLPPYILTLLAEVAVLEEEIVRLEEKVVYIRQDLYQEAVYISSSKPKSEHSPLPNNSNISVTTMDSPKLDKLKSLSQTVDNPAATSTTRPTIPLQENRQGKENKSCTNSFKKRLQPSKQMSKTPIKNLHVDNKSLHKRAHSPRRKKEPRVKAPQMAELRHPSPHQMLPEADCPNVISENILKCLSSILLRISAVKNPGSACDISSPLWTQKPQNHVEGPEFWDPYGICLEFGKRDIGPYKHLCAIDAKSFNAKRTTSTLFLLHRLKLLFRKLASVNLENLNHQEKLAFWINTYNSCMMNAFVENGIPESPDMAVAMMRKAKINVGGHILSATTIEHFILRLPYHYKFTFSKGAKNHEMVARSKYGLELSEPLVTFALSCGTWSSPAVRVYTASQVENELEAAKREYLQATIGISTSKFAIPKLLDWYLQNFAKDLESLMDWICLQLPSELGKEAIKLLEKRKTEPLSQFVQIMPYEFSFRYLLCT* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3710 546 Pfam Leucine-zipper of ternary complex factor MIP1 20 98 IPR025757 -
Tpr1g3710 546 Coils Coil 453 473 - -
Tpr1g3710 546 MobiDBLite consensus disorder prediction 136 189 - -
Tpr1g3710 546 MobiDBLite consensus disorder prediction 1 21 - -
Tpr1g3710 546 PANTHER EXPRESSED PROTEIN 3 545 - -
Tpr1g3710 546 PANTHER TRANSCRIPTION FACTOR 3 545 - -
Tpr1g3710 546 Coils Coil 67 94 - -
Tpr1g3710 546 Pfam Protein of unknown function, DUF547 339 468 IPR006869 -
Tpr1g3710 546 Coils Coil 21 48 - -
Tpr1g3710 546 MobiDBLite consensus disorder prediction 136 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3710 Tpr-Chr1 41214366 41218248 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3710 1 41214366 41218248 Tpr1g3710 1 41214366 41218248 ECH
Tpr1g3710 1 41214366 41218248 Tpr3g3444 3 37983680 37988125 PCT