Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3703 ATGGAGGGAGTGACAAAGTTATCTGTTGAACAAATTCAACCACCTACTTATGGAAACTTGGTAACAATTCTTAGTATTGATGGTGGTGGTATTAGGGGACTCATTCCTGCTGCAATTATTGAATTCCTTGAATCTCACCTTCAGGAATTGGATGGTGAAGATGCAAGGCTTGCAGATTACTTTGATGTGATATCAGGAACAAGTACAGGAGGTCTTGTAACTGCCATGTTAGCTGCTCCAGATAAAAACAACCGTCCACTTTTTGCTGCCAAAGATATCAAACCCTTTTACCTTGAACACTGCCCAAAAATTTTCCCACAACCTAGAGGCCTAGGTGGGACAATATTAGCAAAGGTAATGAGATCTCTTGGAGGACCCAAATATGATGGAAAATACCTTCATGAGGTTGTAAGAGAGAAACTTGGAGAAATTAAGTTGCATGAGACCTTAACCAACATTGTTATTCCTACATTTGACATCAAGACTTTGCAGCCAATTATTTTCTCATCTTATCAGCTTAAGAAATCTCCTTTTTTGGATGTTAAACTCTCAGACATATGCATTAGTACCTCAGCTGCACCTACTTATCTTCCTGCTCACACCTTCACAAATAAACATGAAGAAACTAAAAAAGAAGAGGAGTTCAATCTCATTGATGGTGGTGTTTGTGCAAATAATCCGGCTTTAGTTGCCATGAATGAAGTAACAAAGCAAATCATCAATCAAAGTCCTGATTTCTTTCCAATCAAGCCTCTTGAATATGGTCGATTTCTGATAATTTCATTAGGCACCGGGACAGCAAAAAATGAGGAAAAATTCAGTGCACAAATGGCAGCCAAATGGGGTCTATTGGATTGGTTAACACATAGTGGTTCGAATCCTTTAATCGATGTTTTTACTCAATCAAGTAGTGATATGGTTGATTTTCATTTATCTGCTGTCACTCAAGCTCTTCATTCAGAAGATAATTACCTTCGAATTCAGGATGACACATTAACCGGAATAGATTCTTCTGTTGACATTGCTACTGAGGCGAACTTGAAGAAACTAAGCCAAATTGGTGAGAATTTATTGAAGAAACCAGTCTCTAGAGTCAATTTAGAAAATGGACACTTTGAACCAATAACAACTGGAGAAACTAATGAAGCTGCTCTCATGAGGCTTGCAAAAATACTTTCGCAAGAGAGGAGACTCCGTGAAATGAGATCACCGCATACAAGTAGAGGCAAGAAAGCTCGACATCTAGTTGTATGA 1254 0.3844 MEGVTKLSVEQIQPPTYGNLVTILSIDGGGIRGLIPAAIIEFLESHLQELDGEDARLADYFDVISGTSTGGLVTAMLAAPDKNNRPLFAAKDIKPFYLEHCPKIFPQPRGLGGTILAKVMRSLGGPKYDGKYLHEVVREKLGEIKLHETLTNIVIPTFDIKTLQPIIFSSYQLKKSPFLDVKLSDICISTSAAPTYLPAHTFTNKHEETKKEEEFNLIDGGVCANNPALVAMNEVTKQIINQSPDFFPIKPLEYGRFLIISLGTGTAKNEEKFSAQMAAKWGLLDWLTHSGSNPLIDVFTQSSSDMVDFHLSAVTQALHSEDNYLRIQDDTLTGIDSSVDIATEANLKKLSQIGENLLKKPVSRVNLENGHFEPITTGETNEAALMRLAKILSQERRLREMRSPHTSRGKKARHLVV* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3703 417 PANTHER XYLOSE ISOMERASE 1 408 - -
Tpr1g3703 417 Pfam Patatin-like phospholipase 24 232 IPR002641 GO:0006629
Tpr1g3703 417 CDD Pat17_isozyme_like 18 370 - -
Tpr1g3703 417 SUPERFAMILY FabD/lysophospholipase-like 19 368 IPR016035 -
Tpr1g3703 417 MobiDBLite consensus disorder prediction 403 417 - -
Tpr1g3703 417 PANTHER PATATIN 1 408 - -
Tpr1g3703 417 MobiDBLite consensus disorder prediction 397 417 - -
Tpr1g3703 417 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 24 232 IPR002641 GO:0006629
Tpr1g3703 417 Gene3D Cytosolic phospholipase A2 catalytic domain 10 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3703 Tpr-Chr1 41129256 41132018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3703 12 405 Miscellaneous Gene Families AT2G26560 66.244 0.0 526
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3703 1 41129256 41132018 Tpr1g3703 1 41129256 41132018 ECH