Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3696 ATGTCTACTAAGAATGAACATCATCATACGGTTCCTCTTTCGGTTCTTTTGAAGCGGGAATTGATGAGTGAGAAAATTGAAAACCCTGATATTGTTCATGGTCAAGCTGGGCAAAGCAAGAAAGGAGAGGATTTCACGCTGTTAAAGTCCGACTGTCAGAGGATGGTTGGTGATGGGGTCTATACGTACTCTGTTTATGGGCTATTTGATGGACACAATGGATCTGCTGCTGCTATTTATTCTAAGGAGAATCTTCTAAATAATATTTTAAGTGCAATTCCTCCAGATCTTAACCGAGATGAATGGTTAGCAGCGTTGCCTAGAGCTATGGTTGCAGGCTTTGTAAAAACTGATAAAGATTTTGCTGAGAAAGGACAAAAATCAGGAACAACTGTCACCTTTGTGATTATAGAAGGATGGGTTGTAACGGTTGCATCAGTTGGTGATTCCCGTTGCGTACTAGAATCTTCTGAAGGAGGGATTTATTACTTGTCAGCAGATCATAGGCTAGAAACAAATGAAGAGGAAAGGGTTCGTATCACTTCAAGTGGGGGCGAGGTTGGTCGTTTAAATACAGGGGGAGGTGCAGAGGTTGGTCCGTTGAGATGTTGGCCCGGTGGCCTGTGTCTTTCACGATCTATTGGAGATATGGATATTGGTGAATTTGTTGTCCCTGTACCATATGTAAAACAAGTGAAGCTATCCACTGGTGGAGGCCGTCTTGTTATCTGTAGTGATGGTGTCTGGGATGCTTTAGCTGCAGAAGTGGCCCTTGATTGTTGCCGTGGCATGTCAGCAGAGTCTTCTGCACCACAGATTGTAAAGGAAGCTATACAAGCAAAGGGACTTCGAGATGATACAACCTGCATTGTTGTTGATATATTACCTCAGGAGAAGCCACCTGCTCCTGCGCCACCACCAAAGAAGCCAGTGAAAGGAATGCTCAAGGCTATGTTTCGTAAAAAGTCTTCGGAATCATCTTCTATTGACAAAGAATACTTGGAGCCAGATGTGGTAGTGGAGCTGTATGAGGAAGGTTCTGCTATGCTTTCAGAGAGGTTAGAAACAAAATATCCACTATGCAACATGTTCAAGTTGTTCATATGTGCAGTATGTCAAGTAGAAATAAAACCCGGAGAGGGCATTTCCGTACATGAGGGTGCAGACAACCCTCGGAAAGTGCGCCCTTGGGACGGACCTTTCCTTTGTTTTAGTTGCCAGGAGAAGAAAGAAGCCATGGAAGGGAAAAGAGCATCAGATAGAAATAGCAGCGGAAGTGACGAATGA 1287 0.439 MSTKNEHHHTVPLSVLLKRELMSEKIENPDIVHGQAGQSKKGEDFTLLKSDCQRMVGDGVYTYSVYGLFDGHNGSAAAIYSKENLLNNILSAIPPDLNRDEWLAALPRAMVAGFVKTDKDFAEKGQKSGTTVTFVIIEGWVVTVASVGDSRCVLESSEGGIYYLSADHRLETNEEERVRITSSGGEVGRLNTGGGAEVGPLRCWPGGLCLSRSIGDMDIGEFVVPVPYVKQVKLSTGGGRLVICSDGVWDALAAEVALDCCRGMSAESSAPQIVKEAIQAKGLRDDTTCIVVDILPQEKPPAPAPPPKKPVKGMLKAMFRKKSSESSSIDKEYLEPDVVVELYEEGSAMLSERLETKYPLCNMFKLFICAVCQVEIKPGEGISVHEGADNPRKVRPWDGPFLCFSCQEKKEAMEGKRASDRNSSGSDE* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3696 428 ProSiteProfiles PPM-type phosphatase domain profile. 28 294 IPR001932 -
Tpr1g3696 428 Gene3D - 32 300 IPR036457 -
Tpr1g3696 428 SMART PP2C_4 22 292 IPR001932 -
Tpr1g3696 428 MobiDBLite consensus disorder prediction 409 428 - -
Tpr1g3696 428 SUPERFAMILY PP2C-like 32 294 IPR036457 -
Tpr1g3696 428 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 5 423 - -
Tpr1g3696 428 Pfam Protein phosphatase 2C 58 283 IPR001932 -
Tpr1g3696 428 CDD PP2Cc 37 294 IPR001932 -
Tpr1g3696 428 PANTHER ALPHABET, ISOFORM E-RELATED 5 423 - -
Tpr1g3696 428 SMART PP2C_SIG_2 55 294 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3696 Tpr-Chr1 41070770 41076592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3696 1 427 PP2C-type Phosphatase Gene Family AT1G47380 78.089 0.0 710
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3696 1 41070770 41076592 Tpr1g3696 1 41070770 41076592 ECH
Tpr1g3696 1 41070770 41076592 Tpr3g3457 3 38125399 38132120 PCT