Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3694 ATGCAAGCTTGGGGGAGGTTAGGAGGTTACATAAGACGCGGCGTGTGTAGTGTTTCCGGGCCATTTCTTCCGTTTGGTGGCGCGGTTGATATTATTGTTGTTCAGCAAAAAGATGGGAGTTTTAAATCATCTCCTTGGTATGTTAGATTTGGGAAATTCCATAGGGTTATGAAAGCGGCGAAAAGGGAAAAGGTTAAGGTTAGTGTTAGTGTTAATGGGGTTGAAACTGATTTTCATATGTGTTTGAATCCTAAAGGGGAAGCTTTTTTTCTTCATGCTAATTCACAACACGGGGAAGGAGGAGAAGAACAAATGGAAGAATTACTAGAACAAGATGAAGATGGAACAGAATTGTGGTCTTATGATGATATACAGCTGAGAGGTACTACTAATAAGAGGCAATTCAAGTCGAAAAGTTGCAATTATGATTCGGAAAGGTTGAGTTCTGAGGATCAGGTTGTAGCTGGGAATGGTTCTCGTAGTTCGAGAATATATAGGTTTGTATTTGGGCCAAGTTCTAATGGTGATGGTGAAGATGCTGATGGAGATTTAGTGGAGCGTGCTGAGATTGCAGCCAAGTTGTTGGAGTTAAGGTGGTCTACGAATCTCACTTTTGATGAACTTCCATATAGGGAAAGAAAGAAAACTCAGGGGGCTAACTTGGTCAAAGTGAAATCCAAGTCTGAATCTGGTGAGGTTTTGCGCCCTACGGCTACGTCTCTGCAGCTACCTGAGGGTGGAAAATCTGATAGAGTGACTATTAAGATGCCGGTGACGGATTGTGGTATTTGTGATGTTGCGGATGTTGGAAACATAGCAAAGCTTCAAAAATCTCGGACTGTCAATATTGGTCGAAGGGATTGTTCTGTTAAGAAGGTTAACATAAATACTCCAACGTCTGAACAGCTGTCGTCCTTGAATCTGAAGGAAGGAAGGAACACAATAACCTTCTGTTTCTCTACACCTATGATGGGGAAGCGGCAGATTGACGCTCGAATATTTTTGTGGAAATGGAATACTCGTATAGTGATATCAGATGTGGATGGGACAATTACAAGGTCAGATGTTTTAGGTCAATTCATGCCTTTAGTAGGGATTGACTGGTCACAGTCAGGTGTTGCTCATTTATTTTCAGAAATCAAGGAAAATGGCTACCAGATACTTTTTCTCAGTGCTCGTGCAATTTCTCAGGCACATCACACCAGACAATTCCTATTGAACCTTAACCAGGACGGGAAAGTCTTACCAGATGGTCCTGTTGTTATTTCCCCCGACGGACTTTTTCCTTCTCTGTATAGAGAAGTTATCCGCAGGGCTCCTCACGAGTTCAAAATTGCATGTTTAGAGGACATCAGAGCACTTTTTCCACCTGATTACAATCCATTCTATGCTGGTTTTGGAAATAGAGACACCGATGAAATCAGCTATCTTAAGGTTGGAATCGCCAACGGAAAAATCTTCATTATTAATCCTAAGGGTGAGATTTCTGTAAACCGACGTTGTTTAGACACAAAATCATACACTTCTCTCCATGCTCTCGTGCATGGAATGTTCCCCCCGACAGAATCATCTGAGCAGGAGGATTTCAATTCATGGAATTTCTGGAAGTTGCCTTCTTTCGAATAA 1626 0.4182 MQAWGRLGGYIRRGVCSVSGPFLPFGGAVDIIVVQQKDGSFKSSPWYVRFGKFHRVMKAAKREKVKVSVSVNGVETDFHMCLNPKGEAFFLHANSQHGEGGEEQMEELLEQDEDGTELWSYDDIQLRGTTNKRQFKSKSCNYDSERLSSEDQVVAGNGSRSSRIYRFVFGPSSNGDGEDADGDLVERAEIAAKLLELRWSTNLTFDELPYRERKKTQGANLVKVKSKSESGEVLRPTATSLQLPEGGKSDRVTIKMPVTDCGICDVADVGNIAKLQKSRTVNIGRRDCSVKKVNINTPTSEQLSSLNLKEGRNTITFCFSTPMMGKRQIDARIFLWKWNTRIVISDVDGTITRSDVLGQFMPLVGIDWSQSGVAHLFSEIKENGYQILFLSARAISQAHHTRQFLLNLNQDGKVLPDGPVVISPDGLFPSLYREVIRRAPHEFKIACLEDIRALFPPDYNPFYAGFGNRDTDEISYLKVGIANGKIFIINPKGEISVNRRCLDTKSYTSLHALVHGMFPPTESSEQEDFNSWNFWKLPSFE* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3694 541 SMART lns2 342 498 IPR031315 -
Tpr1g3694 541 PANTHER GH19076P 276 539 - -
Tpr1g3694 541 PANTHER GH19076P 1 225 - -
Tpr1g3694 541 Pfam lipin, N-terminal conserved region 25 99 IPR007651 -
Tpr1g3694 541 Pfam LNS2 (Lipin/Ned1/Smp2) 297 519 IPR013209 -
Tpr1g3694 541 SUPERFAMILY HAD-like 335 481 IPR036412 -
Tpr1g3694 541 PANTHER LIPIN 276 539 IPR026058 -
Tpr1g3694 541 PANTHER LIPIN 1 225 IPR026058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3694 Tpr-Chr1 41052680 41058963 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3694 1 41052680 41058963 Tpr1g3694 1 41052680 41058963 ECH
Tpr1g3694 1 41052680 41058963 Tpr3g3460 3 38156116 38164226 PCT