Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3681 ATGGAAGTTTCAAATATTAATAAGCTGGTGAAGACAGCACCATCCAAAGCTATGGTTGTCAGATTCAATTTGTTCTGTCTTGCCATCTTTCTTATTGTTTATGCAACTCTTCTTCTCCGTCCTTCTTCTTCGGTCTATTTCGATAATGCAGCCTCGCTTGTTAGATGCTCTTTGAGAGAATGTCATCATCAGGGAGAACAAAGCATGAAAATGAAAGCGGTGTTAGAGGAATTACCAAAACCAAAAAAATTATGGAATCCAAAGAAGAACGGAACAAAGATAGAAGTACCAAGTTTTTTACGCGAAAAAATCGGTAAAGGAATGAAAATTGGAATGGTAAACATGAACGAAGATGACAATGATGTAAGCGAATGGAACCTACATGGTGAAACAATACCAATTAATTTCGACAAAGTATCACAATTTTTCAATTGGACGGATTTATTTCCCGAATGGATAGACGAAGAAGAAGAAAGCGATGTTCCAACATGTCCCGAAATACCAATGCCCGAATTCACAACATATGAAAAAATGGATTTAATAGTTGCAAAGTTACCATGCAAGTATCCATTAGAAGGGTGGGGGAGAGAAGTTTTAAGGTTACAAGTTCATCTTATTGTAGCAAATATGGTTGTGAAAAAGGGAAAGAAAGATTGGAAATGGAAGAGTAGAGTTGTTTTTTGGAGTAAGTGTAGACCAATGATGGAAATTTTTAGATGTGATGATTTGGTTAAACATGAAGGTGATTGGTGGTTTTTTGAGGTTGATGTAAAGAGATTGGAACAAAAAATTTCTTTGCCTGTTGGGTCATGTAACTTGGCTTTGCCTCTATGGGAACAAGGGACAGACAAAGTATACGACATAACCAAAATGGAACAAAACGTAAGAAGCAAAACAAGAGCAAAACGTGAAGCATATGCAACAGTACTACACTCTTCAGAAAGCTACGTTTGTGGAGCAATAACTTTAGCACAAAGCCTTCTAAAAACCGGAACCAAACGCGACCTTATACTTCTCATCGACAATTCCATCTCCGTCCGCAAACGACGCGCATTGGCTTCCGCCGGTTGGAAGACTAGAACTATCACCCGAATTCGAAACCCGAGAGCGGAGAATGGAACTTACAATGAGTATAATTATAGTAAGTTTAGGTTATGGCAACTTACTGATTATGAGAAGATTATCTTTATAGATTCCGACATTGTTGTACTTCGAAATCTTGATATTCTCTTCAATTTTCCTCAAATGTCTGCCACTGGGAATGATCAATCCATTTTCAACTCTGGCATCATGGTTATTGAGCCCTCCAATTGCACCTTCAGTGTACTCATGAGCCGGCGCTACGACATCGTTTCATACAATGGAGGTGATCAAGGATTTCTAAATGAGATATTTGTATGGTGGCATAGACTTCCAAGAAGAGTAAACTATTTAAAGAATTTTTGGGCAAACACAACAATTGAAGCAAGTGTGAAAAATGGACTATTTGGTGCTGACCCTCCAAAACTATATGCAATTCATTATCTTGGTTTGAAACCTTGGCATTGTTATAGAGACTATGATTGCAACTGGGATGTTGTGGATCAAAGGGTTTATGCTAGTGATGTAGCACACCAACGTTGGTGGAATTTTCATGATGGAATGGACAAAAAGTTACAAGGTTTTTGTAGGTTGACAAGACAACGTAGGACTGAGTTGAATTGGGAAAGAAGAAGATCTAGTAAGATGGGATCACTTGATCATCATTGGAAGATTAATGTTACTGATCCTAGAAAATCAGGATCTCTTTTGATGGATTAG 1800 0.3789 MEVSNINKLVKTAPSKAMVVRFNLFCLAIFLIVYATLLLRPSSSVYFDNAASLVRCSLRECHHQGEQSMKMKAVLEELPKPKKLWNPKKNGTKIEVPSFLREKIGKGMKIGMVNMNEDDNDVSEWNLHGETIPINFDKVSQFFNWTDLFPEWIDEEEESDVPTCPEIPMPEFTTYEKMDLIVAKLPCKYPLEGWGREVLRLQVHLIVANMVVKKGKKDWKWKSRVVFWSKCRPMMEIFRCDDLVKHEGDWWFFEVDVKRLEQKISLPVGSCNLALPLWEQGTDKVYDITKMEQNVRSKTRAKREAYATVLHSSESYVCGAITLAQSLLKTGTKRDLILLIDNSISVRKRRALASAGWKTRTITRIRNPRAENGTYNEYNYSKFRLWQLTDYEKIIFIDSDIVVLRNLDILFNFPQMSATGNDQSIFNSGIMVIEPSNCTFSVLMSRRYDIVSYNGGDQGFLNEIFVWWHRLPRRVNYLKNFWANTTIEASVKNGLFGADPPKLYAIHYLGLKPWHCYRDYDCNWDVVDQRVYASDVAHQRWWNFHDGMDKKLQGFCRLTRQRRTELNWERRRSSKMGSLDHHWKINVTDPRKSGSLLMD* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3681 599 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 2 7 592 IPR030519 GO:0005794|GO:0009834|GO:0015020|GO:0045492
Tpr1g3681 599 SUPERFAMILY Nucleotide-diphospho-sugar transferases 304 553 IPR029044 -
Tpr1g3681 599 CDD GT8_Glycogenin 304 548 - -
Tpr1g3681 599 Pfam Glycosyl transferase family 8 309 515 IPR002495 GO:0016757
Tpr1g3681 599 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 302 551 IPR029044 -
Tpr1g3681 599 PANTHER GLYCOGENIN SUBFAMILY MEMBER 7 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3681 Tpr-Chr1 40954573 40958724 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3681 71 598 Glycosyltransferase AT4G33330 68.421 0.0 762