Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3679 ATGGAGGAAGTTGATAACAAACCAACCTCCTCAGAATCCTCCTCGAGAAATGTTGAACCGAATTCGCTAGCTGAAACTACTCAAGAAAATACTGATATCATAATAACTCCCACAATTGATCACTCTTCCAATGAAGCTTCCATCAACTCTTCTGATGATAACAATATCGTGGAACATGAAACTCATTTTCAAGCGAATAATTTATCTGAAATAGAATCAAAGTCAACAAATGCAAATGCTTCTGATGATCAATCTATAAGACAAGAAGATGAACATCCTCTCAATGATAATTCAACTTCAACTCCAGAAGAAAAAGTTCAAGAACAAGATGAGTATCTTCCAATAGCTGCAGATTCTGAACCTGAAGCTTTAGAAGATACCTTTAACAGACAACAAGATGTTGGTTCAACTGTTACTGCTAGCGGCGGCGATGTTGATGATAATCATATGGAACTCTCAACATCCTCTTCTGTAACAGAAGGGTTGCAGATTGACCCTAAAGATTCACCTCGGACCGTACTTATTAATGCACCTCAAGAAAATTTAGCTTCATCATCAAATGCTGAAGTTCATGTAACAGAACAAAGTCAACATCAGGAACCTGTGGTTGAAGATTCTGAACAATCTTTAGAAGATATAGTGAACATTTTGTCAAAAAAAAAAGAAGATATAGAGAACATTCTGAAGCATGTTGCTGTTGATAATCAGATGGAACTATCGGCTTCGGATTCTGAAACAAAAGAGTTGGAGAATGATCTCAAAGAACTAAAGGCTATTGTGTCTACAATCAAGGGCTCTGATGTTGCTGTTGGCGCTGTTGACTCGCCTACAGACGCTAAGCAAATTGCTGAAAAAAGAGGCATAATCGATACAGCATCTCCATTTGAATCTGTTAAGGAAGCTGTTTCTAAGTTCGGAGGAATCGTAGATTGGAAGGCTCATAGAATGGTCACCGTAGAGAGACGCAAGCATGTAGAACAAGAGCTTGAAAAAGCGCACGATGAGATTCCGGAGTACAGGAAAAGATCAGAGGTGGCTGAAAAAGAAAAAGTCGAAGCACTTCAGGAGCTTGACAGTACAAAAAGACTAATAGAAGAACTAAAACTGAACCTAGAGAGGGCAAAAACCGAAGAGCGTCAAGCAAAACAAGACTCAGAACTTGCAAAGCTAAGAGTGGAAGAGATGGAGCAAGGTATTGCCGAAGATTCTAGCGTGGCGGCCAAGGCTCAGCTTGAGGTTGCTAAAGCAAGGTATACATCTGCAATTACCGAGTTAACATCGGTGAAAGAGGAGCTAGATGCGTTGCGTGTGGAATATGCTTCCTTAGTTGATGAAAAAGGCGAAGCTATCAACAAAGCCGAAGTAGCTGTTGCTGCATCAAAACAAGTAGAAAAGGCAGTAGAAGATTTGACTATTGAGTTAATTGCCACCAAGGAGTCTTTGGAAACGGCACATTCTGCACATATGGAAGCAGAAGAACACAGAATAGGAACAGTCATGGCAAGAGATCAAGATTTTCTCAATTGGGAGAAGGAACTTAAACAACAAGAAGAAGAACTAGAAAAACTCAACCAGAAAATTTTGTTTTCTAAGGATCTTAAATCTAAACTTAGGAAATCCTTTACATTGTTGCTTAATTTGAAAGCCGAATTAAATGCCTATATGGAATCAAAGTCAAACCACAAAGGCGATGAAGGAGTAACGAAAGAGAAACGAGAGAAGAAATCACACAATGAAATACAAGAAGCAATTGCATCAGCCAGAAAAGAACTTGAGGAAATAAAGCTTAACATAGAGAAAGCTACTTCTGAGGTAAGTTACTTAAAGGTGACTGCAACATCATTAAGATCAGAACTCGAACAAGAGAAATCATCGCTCAACTCGATGAGGCAAAGAGAGGGAATGGCCTCAGTTACAGTTGCATCTATTGAAGCCGATCTGGACAAAATTAAATCGGACATCACTTTTGTTCATATGAAGGAAAAAGAAGGCAAAGACACTATCCTTGAGCTTCCAAAGAAACTAAAAGAAGCGGACGAAGAGGCTAATAAAGCAAACTCGCTTGCTCAAGAAGCTCGCGAAGTGCTTCGGAGAGTACAGGAAGAAGCAGAACGAGCCAAGGCCGGTGCAATTACAATGAATAGTAGATTACTTGCAGCTCAAAAGGAGATAGAAGCTGCAAGAGCTTCTGAAAGGTTGGCAATACAAGCAATTAAAGCATTGCAAGAGAGTGAATCGGCTAGAAGCAACAACAATGAAGTGGATCCATCGAATGGTGTGATACTTTCGGTTGAAGAGTACTATCATCTTACGAAACAAGCTCATGATGCAGAAGAAAAAGCCAATGTGAGAGTTGCGACCGCGAATTCTGAGATTGATATAGCTAAGGAGAATGAACTGAAAACATTGGAGAAGTTGAATGAAGTGAACAAAGAAATGGCTGCAAGAAGAGAATCTTTGAAGATTGCAATGGGAAAAGCTGAGAAGGCAAGGGAAGGAAAATTAGGTGCAGAACAAAAATTAAGAAAGTGGAGATCAGAACATGGACAACGCAGAAAAGAGGGCGAAGTAGGCCAAAGATCGGTAAACCAGAACACAAGTCATGGCGGTAAACTTAATCCAAATCATAGTGCAACTTTTCCTGTAAGTTACTTTTCAAGTCAAAAATCTTATGTTCATGCAAACAATGAAAATGGATCTCCACCGGATGCGAGAAGTGGAAAAAAGAAGAAAAAGTCGTTTTTTCCACGGTTTTTTATGTTCTTTGGAAGAAGAAAAACACATTAA 2787 0.394 MEEVDNKPTSSESSSRNVEPNSLAETTQENTDIIITPTIDHSSNEASINSSDDNNIVEHETHFQANNLSEIESKSTNANASDDQSIRQEDEHPLNDNSTSTPEEKVQEQDEYLPIAADSEPEALEDTFNRQQDVGSTVTASGGDVDDNHMELSTSSSVTEGLQIDPKDSPRTVLINAPQENLASSSNAEVHVTEQSQHQEPVVEDSEQSLEDIVNILSKKKEDIENILKHVAVDNQMELSASDSETKELENDLKELKAIVSTIKGSDVAVGAVDSPTDAKQIAEKRGIIDTASPFESVKEAVSKFGGIVDWKAHRMVTVERRKHVEQELEKAHDEIPEYRKRSEVAEKEKVEALQELDSTKRLIEELKLNLERAKTEERQAKQDSELAKLRVEEMEQGIAEDSSVAAKAQLEVAKARYTSAITELTSVKEELDALRVEYASLVDEKGEAINKAEVAVAASKQVEKAVEDLTIELIATKESLETAHSAHMEAEEHRIGTVMARDQDFLNWEKELKQQEEELEKLNQKILFSKDLKSKLRKSFTLLLNLKAELNAYMESKSNHKGDEGVTKEKREKKSHNEIQEAIASARKELEEIKLNIEKATSEVSYLKVTATSLRSELEQEKSSLNSMRQREGMASVTVASIEADLDKIKSDITFVHMKEKEGKDTILELPKKLKEADEEANKANSLAQEAREVLRRVQEEAERAKAGAITMNSRLLAAQKEIEAARASERLAIQAIKALQESESARSNNNEVDPSNGVILSVEEYYHLTKQAHDAEEKANVRVATANSEIDIAKENELKTLEKLNEVNKEMAARRESLKIAMGKAEKAREGKLGAEQKLRKWRSEHGQRRKEGEVGQRSVNQNTSHGGKLNPNHSATFPVSYFSSQKSYVHANNENGSPPDARSGKKKKKSFFPRFFMFFGRRKTH* 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3679 928 Coils Coil 612 632 - -
Tpr1g3679 928 Coils Coil 675 709 - -
Tpr1g3679 928 Coils Coil 322 393 - -
Tpr1g3679 928 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 263 927 - -
Tpr1g3679 928 Coils Coil 239 259 - -
Tpr1g3679 928 MobiDBLite consensus disorder prediction 1 112 - -
Tpr1g3679 928 MobiDBLite consensus disorder prediction 825 911 - -
Tpr1g3679 928 MobiDBLite consensus disorder prediction 859 902 - -
Tpr1g3679 928 MobiDBLite consensus disorder prediction 559 579 - -
Tpr1g3679 928 Coils Coil 425 445 - -
Tpr1g3679 928 MobiDBLite consensus disorder prediction 180 197 - -
Tpr1g3679 928 MobiDBLite consensus disorder prediction 180 207 - -
Tpr1g3679 928 Pfam Weak chloroplast movement under blue light 286 851 IPR008545 -
Tpr1g3679 928 PANTHER WEB FAMILY PROTEIN-RELATED 263 927 - -
Tpr1g3679 928 Coils Coil 577 604 - -
Tpr1g3679 928 MobiDBLite consensus disorder prediction 84 111 - -
Tpr1g3679 928 Coils Coil 506 533 - -
Tpr1g3679 928 MobiDBLite consensus disorder prediction 825 858 - -
Tpr1g3679 928 Coils Coil 778 823 - -
Tpr1g3679 928 MobiDBLite consensus disorder prediction 10 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3679 Tpr-Chr1 40931104 40935492 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3679 1 40931104 40935492 Tpr1g3679 1 40931104 40935492 ECH