Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3676 ATGGATTCAACTTTCCTTTACATCATTGTCCTCTTTCTTCTTACCTTATTTTCATTTAAGTTCTTTCCAAAACCAAAAAATAGAACAAACCAAACAAGTGCAAAGCTTCCTCCTGGTTCAATGGGATGGCCTTACATAGGACATACCCTCCAACTCTACTCTCAAGACCCAAATGTTTTCTTCTTCTCAAAACAAAAAAGGTACGGAGAAATATTTAAGACGAACATCCTAGGATGTCCATGTGTGATGTTGGCAAGTCCAGAAGCTGCACGTTTTGTTCTTGTGACACAATCTCACTTATTTAAACCAACATATCCTAAAAGCAAAGAACGTTTGATTGGTCCTAGTGCTTTGTTTTTTCACCAAGGTCAGTACCACTTGCGTTTGAGGAAGCTTATTCAGAAGTCACTCTCCCTTGATTCACTTCGCAATTTGGTTCCTCGTATTGAAGCTTTAGCCATTTCCACTATCAAATCTTGGGGTGATGATGGATTCATCATTAACACTTTTAAGGAAATGAAAAAATTTTCATTTGAAGTTGGTATTCTCAAGATTTTTGGAAATCTAGAGCCAAGGTTGAGGGAAGAGTTAAAGAAGAATTATTGGATTGTTGACAATGGTTACAATTCATTTCCAACTCAAATTCCTGGCACACAATACAAAAAGGCGCTATTGGCAAGAAAGAGACTTGGAAGTATTTTGAAGGAAATAATTAGTGAGAGGAAGGAAAAGAATTTGGTTGAAAGTGAAAGAGATCTTTTGAGTTGTTTATTGAATTGGAAAGGTGAAGGTGGAGAAATGTTATGTGATGATGAAATTGGAGATAACATTATTGGAGTTCTTTTTGCTGCTCAGGATACCACAGCTACTGTCATGACTTGGGTGGTCAAGTACTTGCATAATGAACCTAAACTTCTTGAATGTGTAAAGGCTGAGCAGAAGGCAATTCACAAAGAAAATGATGGTAAACTACAGCTGAGTTGGAATCAGACTAGAAACATGCCAATTACCAATAAGGTTGTGTTAGAGAGCATGAGAATGGCAAGTATTATATCATTTCCTTTTAGAGAAGCAGTAGCTGATGTAGAGTACAAGGGATTCCTAATACCAAAAGGGTGGAAAGCAATGCCATTGTTCAGAAATATTCATCATAATCCAGAATTTTTTCCAGACCCTCACAAATTCAACCCTTCAAGGTTTGAGGTTTCACCAAAGCCAAATACTTTCATGCCATTTGGCAGTGGAGTACATGCTTGTCCTGGCAATGAGCTTGCTAAGCTGGAGACACTAATTATGATCCATCATTTGGTCACCAAGTTTAGGTTGGAAGTGATAGGATCACAATGTGGGATTCAATATGGCCCATTTCCACTGCCTTTGAATGGACTCCCAGCCAGGTGTTGGAGAGAATCTACCAGCAGCTAG 1425 0.3832 MDSTFLYIIVLFLLTLFSFKFFPKPKNRTNQTSAKLPPGSMGWPYIGHTLQLYSQDPNVFFFSKQKRYGEIFKTNILGCPCVMLASPEAARFVLVTQSHLFKPTYPKSKERLIGPSALFFHQGQYHLRLRKLIQKSLSLDSLRNLVPRIEALAISTIKSWGDDGFIINTFKEMKKFSFEVGILKIFGNLEPRLREELKKNYWIVDNGYNSFPTQIPGTQYKKALLARKRLGSILKEIISERKEKNLVESERDLLSCLLNWKGEGGEMLCDDEIGDNIIGVLFAAQDTTATVMTWVVKYLHNEPKLLECVKAEQKAIHKENDGKLQLSWNQTRNMPITNKVVLESMRMASIISFPFREAVADVEYKGFLIPKGWKAMPLFRNIHHNPEFFPDPHKFNPSRFEVSPKPNTFMPFGSGVHACPGNELAKLETLIMIHHLVTKFRLEVIGSQCGIQYGPFPLPLNGLPARCWRESTSS* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3676 474 PANTHER CYTOCHROME P450 26 8 468 - -
Tpr1g3676 474 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3676 474 PRINTS E-class P450 group I signature 272 289 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3676 474 PRINTS E-class P450 group I signature 292 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3676 474 PRINTS E-class P450 group I signature 338 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3676 474 PRINTS E-class P450 group I signature 378 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3676 474 PRINTS E-class P450 group I signature 409 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3676 474 PRINTS E-class P450 group I signature 419 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3676 474 PRINTS P450 superfamily signature 283 300 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3676 474 PRINTS P450 superfamily signature 339 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3676 474 PRINTS P450 superfamily signature 410 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3676 474 PRINTS P450 superfamily signature 419 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3676 474 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 8 468 - -
Tpr1g3676 474 Pfam Cytochrome P450 37 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3676 474 Gene3D Cytochrome P450 25 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3676 474 SUPERFAMILY Cytochrome P450 32 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g3676 474 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 412 421 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3676 Tpr-Chr1 40915870 40920000 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3676 1 471 Cytochrome P450 AT3G19270 64.195 0.0 630
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3676 1 40915870 40920000 Tpr4g1883 4 19812541 19816412 ECH
Tpr1g3676 1 40915870 40920000 Tpr1g3676 1 40915870 40920000 ECH