Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3672 ATGCGGGATTTAGGGTTTCACGAACAACGACGCTCATGGAGGCGTAACACCGCTCCAACAAGACGTAACGCCGCCGCTGCCGCTGCCTCCGCCGGCGATACAAGTCCTGACTCTGTCATCTTTACTCTCGAATCTAACTTGAGTCTCTTCTCTTCTGCTTCCGCTAGCGTCGATCGCTGTTCCTTCGCTTCCGATGCTCATGACCGCGACTCTTTAAACTCCGAAATCTCACTGCATTTGGCAGGTCACGGTGGTGATTTTGCTCCGAGTGAAAGCTGGAGCGGTCCAGATCCGGATCCGGATCCGAATCAAAACAAACAGCAACATGCAGATTCAGTACAGAAAAAGAAGATTCGCGAAACTATTTTCTCTGGAAAAGGAGAAAAAACAAAAGTTCAAAAGGAAGACAGTGACGTTGACACTGAAGAAGACGGAAATCAACTTGTGGAATTTGATTCTGCAAGAAACTCTTTCTCTCTAGCTCTTAAAGAATGTCAAGATCGGAGATCGAGATGTGAAGCTTTATTCAAGAAGCAAGATCGGAGAAGACCTGCTTCGTTAGATCTGAACAATGCTAATGCAATTGGAACTGTTTCTGTTTCGCCTCGTTTGGGAGTTGGAGCTATGAAGAAGAGTACGGTTGCGTCTCGGAGATCTGGCTCTGGTACTGGTACTGGTACTTTTCCGAGTCCTGGTACTCCGAATTATCGTCATTGTCAGGGTGGTGTTGCAATGCAAAAGGGTTGGAGTTCTGAGAGAGTTCCTTCGCATACGAGTGGGGCTCGCAAGCAAGTTGGTAATGGTACAGGTGCATTGTGTTTAACCAATGGGAGAACGTTGCCGTCTAAGTGGGAAGATGCTGAGAGATGGATTTTGAGTCCTGTTTCGGGTGATGGAGCTGGGAGGGCCTCAGTTCCACAGCCATTGAGAAGGCCTAAGTCGAAGAGTGGTCCACTCGGTCCGCCTGGTGTTGCATATTATTCGCTGTATTCGCCTGCAGGTCACTTTTTTGATGGAGGGAATTTTATGACAGCTTCACCTTTTTCTGCTGCTGTTAATGCTTCAGCTGATGGGTTTGCAAATAGTTCTGGTGGTAATGGTGGTGGAGCACTTCCCACACGAACGGATCCTTGCATGGCTCGCTCAGTTAGTGTACATGGCTGTTCTCAGACGCAGGGTCAATCGTCAATTCCCACCCGAGAGGAGAAGTTTGATGCTTTTAAGGATGCGGGCACCAATGTATCTCCTGCTGTTTCAAGAAGAGATATGGCAACCCAGATGAGCCCAGAGGGCAGCTCATGCTCCTCTCCCAATATGAGAACTTCTTTCTCTGCTTCCACTCCACCTGCCCTGCCTATCACAGAGCTGCAGAGTGCCTCTTTCTCTAAAATGGATATCAGGGATGTGCAGGTAGATGAACGTGTAACCATGACAAGGTGGTCAAAGAAACACAGAGCCCTATTCACTGGTAGAGGTTCAGAAAATGTTGACAGCTGGAAAAAGAAAGAAACAAGCACTGAATCTTCATCTTGGGAAATTTCTGAAAGCTCAAAGACTGTTTCAAAGGCTAAAAGGGAGGAAGCCAAAATCACTGCATGGGAGAACTTGCAAAAGGCAAAAGCTGAGGCTGCAATACGGAAACTAGAGATGAAGTTGGAAAAGAAGCGAGCATCTTCCATGGACAAGATTATGAACAAACTGAGATTTGCTCAGAAAAAGGCTCAAGATATGAGAAGTTCAGTTTCAGCCAACCAGGCTCATCAAATTGCCCAAACTTCTCACAAGGTTATGTCATTTCGGAGAGCCAGCCAGATGGGTACTTTGAGTGGCTGTTTCACCTGTCATACCTTTTAA 1854 0.4698 MRDLGFHEQRRSWRRNTAPTRRNAAAAAASAGDTSPDSVIFTLESNLSLFSSASASVDRCSFASDAHDRDSLNSEISLHLAGHGGDFAPSESWSGPDPDPDPNQNKQQHADSVQKKKIRETIFSGKGEKTKVQKEDSDVDTEEDGNQLVEFDSARNSFSLALKECQDRRSRCEALFKKQDRRRPASLDLNNANAIGTVSVSPRLGVGAMKKSTVASRRSGSGTGTGTFPSPGTPNYRHCQGGVAMQKGWSSERVPSHTSGARKQVGNGTGALCLTNGRTLPSKWEDAERWILSPVSGDGAGRASVPQPLRRPKSKSGPLGPPGVAYYSLYSPAGHFFDGGNFMTASPFSAAVNASADGFANSSGGNGGGALPTRTDPCMARSVSVHGCSQTQGQSSIPTREEKFDAFKDAGTNVSPAVSRRDMATQMSPEGSSCSSPNMRTSFSASTPPALPITELQSASFSKMDIRDVQVDERVTMTRWSKKHRALFTGRGSENVDSWKKKETSTESSSWEISESSKTVSKAKREEAKITAWENLQKAKAEAAIRKLEMKLEKKRASSMDKIMNKLRFAQKKAQDMRSSVSANQAHQIAQTSHKVMSFRRASQMGTLSGCFTCHTF* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3672 617 MobiDBLite consensus disorder prediction 295 317 - -
Tpr1g3672 617 Coils Coil 560 580 - -
Tpr1g3672 617 MobiDBLite consensus disorder prediction 110 138 - -
Tpr1g3672 617 Coils Coil 538 558 - -
Tpr1g3672 617 MobiDBLite consensus disorder prediction 214 233 - -
Tpr1g3672 617 MobiDBLite consensus disorder prediction 1 15 - -
Tpr1g3672 617 MobiDBLite consensus disorder prediction 1 37 - -
Tpr1g3672 617 Pfam Remorin, C-terminal region 503 605 IPR005516 -
Tpr1g3672 617 PANTHER OS02G0116800 PROTEIN 106 615 - -
Tpr1g3672 617 MobiDBLite consensus disorder prediction 88 145 - -
Tpr1g3672 617 MobiDBLite consensus disorder prediction 213 233 - -
Tpr1g3672 617 PANTHER REMORIN FAMILY PROTEIN 106 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3672 Tpr-Chr1 40863869 40868725 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3672 1 40863869 40868725 Tpr1g3672 1 40863869 40868725 ECH