Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3671 ATGGGTACCGAACAACCAAATGGAGATTATCTATTCTTGAATTCACATGAAGCAAGTGTTGTTGATTTAGTGAGTCTTTTGTTTTCATCAAATTTATCAAATAGAAAATTCATTGATTGTCCACAAGGACTTGAAGCAAGATTATTTAGACAAAGATGGCTTCTATTTACTTCTGTTGTTGCACAAAAGATTCTTGTTGCTATAGATCCTTTTTTGAAAATGTTAGGAGACATGTTGGAGTTGTTGCTCAATAGTTTATCAAGTAATGGAGGATTTGTTAGGCTCTTCTTCAACTTTCTTAAAGGAAAAATGATAACACCGGAAAGATCATCGGCGGAGTTCTTATCGGTGATTGGCCATCTTGACACAAGAGTTGATTTAGACAAAACTATTCATCATAAGGATGCTAAGTACAAAGGATTACTATCTATCATGGCTTCTAAGTTTTCCTATGAGAATGAACAATTCATTAGCAATGCAGTTACAAATCATTGGGGTATGAAATTTTTGGGGCTATACAGCTTTTGGAACGATTACCAGAAGCATGAGTCCACAAAAGCCATGATAGTGCAAGATACAAAATCTGAACCTAATTTGATTGTGGTTGCATTTAGAGGCACAACTCCATTTGATGCTGAGCAGTGGAAAACAGACGTGGATATCTCATGGTATGACCTACCAAACGTGGGTAAGATACATGGTGGGTTCATGAAAGCATTGGGCCTTCTTGAGAACAGTGGATGGCCCAAAGAAATGGATGAAAAAGGCCCACATCGTTATGCTTACTACACAATTAGAGAAGAGCTGAGAGCAATGTTGAGGGAAAATGAGGATGCAAAATTCATTTTGACAGGGCACAGTTTGGGAGGAGCATTGGCTATTCTGTTTGTATCAATGCTCATATTCCATGAGGAAGAAGTGTTGTTGGATAAGTTAGAAGGTGTTTATACATTTGGGCAACCAAGAGTAGGAGATGAAATGTTTGGGGAGTTCATGAAAAGTAAGTTGAAAAAGTATGATGTGAGGTATATGAGATATGTTTACAGTAATGATATGGTTCCTAGGATCCCTTATGATGATAAATCCCTCTTCTTTAAGCACTTCAGTCCTTGCCTCTATTTCAACAGCCTTTACCAAGGGCAGATTCTAGAGGAGGAGCCAAACAAGAATTATTTTTCTGTGTTCTGGGTGATACCCAAGATCTTAAATGCATTTTGGGAGGTGATTAGAGGCTTCCTTCTACCTTTAGTTGTAGGTAGAGAGTATAAACAGAATTTGTTCATGGTGGTGTTCAGGCTAGTTGGATTGGTAATTCCAGGACTACCAGCTCATTGCCCTGAAAATTACGTCAATGCTGCCCGATTGGGATCGTTAAATGAAAATCTGGAGCTTCCAAATTCTAAATATGACTAA 1413 0.38 MGTEQPNGDYLFLNSHEASVVDLVSLLFSSNLSNRKFIDCPQGLEARLFRQRWLLFTSVVAQKILVAIDPFLKMLGDMLELLLNSLSSNGGFVRLFFNFLKGKMITPERSSAEFLSVIGHLDTRVDLDKTIHHKDAKYKGLLSIMASKFSYENEQFISNAVTNHWGMKFLGLYSFWNDYQKHESTKAMIVQDTKSEPNLIVVAFRGTTPFDAEQWKTDVDISWYDLPNVGKIHGGFMKALGLLENSGWPKEMDEKGPHRYAYYTIREELRAMLRENEDAKFILTGHSLGGALAILFVSMLIFHEEEVLLDKLEGVYTFGQPRVGDEMFGEFMKSKLKKYDVRYMRYVYSNDMVPRIPYDDKSLFFKHFSPCLYFNSLYQGQILEEEPNKNYFSVFWVIPKILNAFWEVIRGFLLPLVVGREYKQNLFMVVFRLVGLVIPGLPAHCPENYVNAARLGSLNENLELPNSKYD* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3671 470 Pfam Lipase (class 3) 201 360 IPR002921 GO:0006629
Tpr1g3671 470 Gene3D alpha/beta hydrolase 130 398 IPR029058 -
Tpr1g3671 470 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 5 462 IPR044819 GO:0004806|GO:0006629
Tpr1g3671 470 CDD Lipase_3 142 375 - -
Tpr1g3671 470 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 5 462 - -
Tpr1g3671 470 SUPERFAMILY alpha/beta-Hydrolases 144 392 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3671 Tpr-Chr1 40859937 40863886 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3671 5 468 Acyl Lipid Metabolism Gene Families AT1G56630 53.320 2.88e-180 512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3671 1 40859937 40863886 Tpr1g3671 1 40859937 40863886 ECH