Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3663 ATGCTAGGAAGAGAAGAGAAGAGCATGTATTCTCTTTGCCTCCAAAACGCAACAACACTACACACTTTCCATTTTCCCTCCAACCTAACTTCTTCTCTTCTTTTCCCAATCAATAATCACAAATTATCCTCAAAAGCCCGTTTCCAATGCTCCATCAAAACCAATAACACAAACACCAAACAAGTCACTAACAAAAAGGTTCTAATCCTATGGGACCTCGACAACAAACCTCCACGTGGACCTCCATACAACGCCGCACTCTCTCTCAAAACCCTCGCCGAACGCTACGGCGACGTCGTTTCAATCTCCGCTTATACAATTCGACACTCCTTCTTCAATCTCCCTCAATGGCATCCCGAACAAAACCCTAACCCTAATTCCATGATTTGCCGTGTCTGTGGCCGTGAATGCAAATCATTCTTCGATCTCCATGTTCATTTCAAGAAAGTTCACGAGTACCAGCATCAGATGTGGCTGAAACGAGTGAAATCGATTAAATTGAGTCGGTTGAAGGTTGGGTTTAGACGTAGAAGGCATATGCATAATGAGGCTGCGAGGACTATTGCTCCGCCTAGGGTTGGATTTGGATTGGCTTCGGAGTTGCGGCGTGCTGGTGTTTTTGTGAAGGTTGTGGAAATTGGTGATAAGGTGAATGCTGCTGATTCCTCGTTGAAGAGGGAGGTGATGAGTGGAGGGATTGATTATTTGATTTTGGTTTCGGATGATTCGGAGTATTGGGAGATGTTGAGGGAGGTGAGGGAGAAGAAATTGGGGAATGTTGTTGTTGTTGGAGATTATTGGGATAGGTATTTAGGGAGGAATGCTGATTTGTGGCTTCCTTGGATTGTTGTTGAGAATGGGAAGGTTGATGGAATGGATTCGATGGGAAGAGGAACATTAACAGAGGATTTGGATGATGAATTGGAAGAAGATGATAATGTGGATGATGAGTATACAATAGAAGAAGAACAAGAAGAAGATGGGTTTTATGTTTATTAA 999 0.4324 MLGREEKSMYSLCLQNATTLHTFHFPSNLTSSLLFPINNHKLSSKARFQCSIKTNNTNTKQVTNKKVLILWDLDNKPPRGPPYNAALSLKTLAERYGDVVSISAYTIRHSFFNLPQWHPEQNPNPNSMICRVCGRECKSFFDLHVHFKKVHEYQHQMWLKRVKSIKLSRLKVGFRRRRHMHNEAARTIAPPRVGFGLASELRRAGVFVKVVEIGDKVNAADSSLKREVMSGGIDYLILVSDDSEYWEMLREVREKKLGNVVVVGDYWDRYLGRNADLWLPWIVVENGKVDGMDSMGRGTLTEDLDDELEEDDNVDDEYTIEEEQEEDGFYVY* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3663 332 ProSitePatterns Zinc finger C2H2 type domain signature. 130 151 IPR013087 -
Tpr1g3663 332 PANTHER OS06G0166200 PROTEIN 42 325 - -
Tpr1g3663 332 MobiDBLite consensus disorder prediction 301 332 - -
Tpr1g3663 332 PANTHER - 42 325 - -
Tpr1g3663 332 MobiDBLite consensus disorder prediction 303 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3663 Tpr-Chr1 40758269 40763882 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3663 42 293 C2H2 Transcription Factor Family AT5G52010 44.526 3.84e-70 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Tpr1g3663 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3663 1 40758269 40763882 Tpr1g3663 1 40758269 40763882 ECH