Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3662 ATGACTCAGTGGTTACATATACATGTTGCAGTAGTAGCATCCTTAATTGGATGTTTTTCAACCCTTTTGTTTGTTTTCATTTGGAGGTTATGTCATGATAAGAAAGATGAAAAGAAATTTGTTGAATCAAATAGCTTGACCAGAATAGAGAGCCATGAAAGAAGATTTGATCAAAGGATAAAGAAAAAAGGTTATGGAAGAAAAGATTTGTTCAGCTGGATTGATCATCCATATCTAGCTTCTGATGCTGTTGAAAATGGATGGTCAAGATTTGCTTTCATAATCTACAATAGTAGCATTTCAATGTCATCAAAAAAATCAACTTCATCAACCCTTTTAGGAGCATGTGTTAGTGGTGAATATGGAATAGAAAATGAGGCTGAGATAAGTTGGGAAGTGTGTCAAGGATCAAATGAATTCATGCAGAAGATAAGACTCAATCCTGGTTTGAAAATGTGTTTAAACAACACTTTTACTACAAGTGTTGCTTCTGTTATTAGGACTTCTTTGCCTCTTCCTGGTCCTTCTTTAGGGAACCATGCATTTCCACAAGAAGCTTATTTTGAAATCACTGTATTGTATTCTTGTGGTGGAGATGATCATGAATTGGTAGGAAGAAAAGAAGGGGAGAAAACTAAACTACTCATTGAAGATAGTTCAAATGATGAAGGTGGTTTGAAAAGTGTTGAAGAAATGAAAGTGGAAGGAAAAGAAAGTGGGAAAAGTGGATCTGTGATGTTGTCATTGGGGTTAACTGCTGGAGAAAGTGTTCCTTTAAGAGTTCCAGGGACTTACCCTAGAAGCATAGGGTTCAACTCCAATGGTTCTGTTTTTCTTGATGGAATGAAACTTGTATTTGAGTCAGACAAAGCACAATGGGTAGGAACTGATACAGTAATTGGTTGTGGATTTGATCCAAGGAAAAGGAAAGTTTTCTTCACATTAGACTCAGAATTGGTGCATGTAATTCACTGTCAAACAGAAGAATACAGCACTCCACTGTATCCAACTTTGACTGCAAATATAGACATTATGGTTTTAGTTAATTTTGGACAAATTGCATTCAAATATGCTCCTGCAAATGCACAAAGAACACCAAATCCATGCTTCATAGCACCACTTGTACATTCCCCTGGTGCTACCCTTGGCTTCGATGACAGTAAGGAACTATTTTCCATGGGAAGGATTGATTCGCCGTGGCAAAATCAATCTGCAACGAAAGGAAATCACAACAATGGGAATAATAACAATGTAGCATTTGATTTTGATGAGGAGTCTGAAGCTGATTTATTTGAAATTGTGTTGGATGGTTCAGAAAAATCACCATACTCAGTATCATTATCATAG 1347 0.3645 MTQWLHIHVAVVASLIGCFSTLLFVFIWRLCHDKKDEKKFVESNSLTRIESHERRFDQRIKKKGYGRKDLFSWIDHPYLASDAVENGWSRFAFIIYNSSISMSSKKSTSSTLLGACVSGEYGIENEAEISWEVCQGSNEFMQKIRLNPGLKMCLNNTFTTSVASVIRTSLPLPGPSLGNHAFPQEAYFEITVLYSCGGDDHELVGRKEGEKTKLLIEDSSNDEGGLKSVEEMKVEGKESGKSGSVMLSLGLTAGESVPLRVPGTYPRSIGFNSNGSVFLDGMKLVFESDKAQWVGTDTVIGCGFDPRKRKVFFTLDSELVHVIHCQTEEYSTPLYPTLTANIDIMVLVNFGQIAFKYAPANAQRTPNPCFIAPLVHSPGATLGFDDSKELFSMGRIDSPWQNQSATKGNHNNGNNNNVAFDFDEESEADLFEIVLDGSEKSPYSVSLS* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3662 448 PANTHER RAN BINDING PROTEIN 9-RELATED 6 444 - -
Tpr1g3662 448 PANTHER SPLA/RYANODINE RECEPTOR (SPRY) DOMAIN PROTEIN 6 444 - -
Tpr1g3662 448 CDD SPRY_RanBP_like 231 351 IPR044736 -
Tpr1g3662 448 Gene3D - 149 365 IPR043136 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3662 Tpr-Chr1 40753818 40756678 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3662 1 40753818 40756678 Tpr1g3662 1 40753818 40756678 ECH