Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3660 ATGGAAGCTGGGGAAGATTGTTGTGTTAAAGTTGCGGTTCATGTTCGACCATTAATCAATGATGAGAAGCTTCAAGGTTGTAAAGATTGTGTAACTGTTGTTTCAGGGAAACCTCAGGTACAAATTGGTGCGCATTCATTTACATTTGATCATGTTTATGGGAGCAATGGTTCACCCTCATCTGCCATGTTTGATGAATGTGTTGCTTCCCTTGTTGGTGGTTTGTTCCAAGGATATAATGCCACTGTTCTCGCATACGGTCAGACAGGTTCCGGGAAAACATACACAATGGGCACTGGCTCTAAAGATTATTATCAAACCGGAATAGTACCCCAAGTTATGAGTGCATTGTTTAGTAAAATTGAGACCTTAAAGCATCAGATTGAATTTCAGCTGCATGTTTCCTTTATTGAGATTCTTAAAGAAGAAGTAAGAGATTTGCTGGACCCATCTTCTATGAACAAATCAGATACTACAAATGGACATACAGGGAAAGTGACTATTCCTGGTAAACCGCCAATACAAATTCGCGAGGCTTCAAATGGCGTCATTACCCTAGCAGGGTCTACTGAAGTCAGTGTTGCAACACTAAAGGAAATGTCTGCTTGCCTAGAACAAGGATCGTTGAGTAGAGCAACTGGGAGTACAAATATGAATAACCAATCCAGTCGTTCACATGCCATCTTCACCATCACATTAGAGCAGATGCGGAAGCCCACCAGCCCTAATGAGAACGGTTTAAATGATACCATGAATGAAGAGTATCTTTGTGCCAAGTTGCACTTAGTAGATCTTGCTGGATCAGAACGAGCTAAAAGAACAGGATCTGATGGTTTGCGTTTTAAGGAAGGAATTCACATTAACAAAGGCTTACTAGCACTTGGCAATGTGATTAGTGCACTCGGTGATGAAAAAAAGAGAAAAGAAGGCGTTCATGTTCCTTATAGGGATAGTAAACTTACCAGGCTTTTGCAGGATTCACTTGGTGGTAACAGCAGAACTGTTATGATAGCCTGCATAAGTCCTGCTGATATTAATGCCGAGGAAACCCTTAACACTTTGAAGTATGCAAATCGTGCACGCAATATCCAAAATAAGCCTGTCGTCAATAGAGATCCGATGTCCAGTGAGATGCTTAAAATGCGACAACAACTAGAGTATTTGCAAGCAGAACTTTGTACTCGTTCCGGTGGCTCTTCCGAGGAGGTTCAGGTCCTCAAGGAAAGAATTTCTTGGCTTGAAGCAGCTAATGAGGATCTTTGCCGCGAACTCCACGAATATCGTAGTAGAGGTTCTGTTGCAGTACAAAGTGATAAGGATGCCTATGATGGTAGCTTGTGCAATACAAAGGCTGATGGGCTTAAAAGAAGCTTACCTTTCACAGCCTCTGATTATCCTATGACTGAAGCAACAGGGGATTCGAGAGAAATTGAAGAAGTGGAAAAAGAGTGGGAGCATACACTGCTGCAAAATAGTATGGATAGAGAGTTACACGAATTGAATAAACGCTTGGAGCAGAAAGAGTCGGAGATGAAGCTCTTTGGAGTATCGGATGCAGAAGCATTCAAGCAGCACTTTGGAAGGAAGATCATGGAACTTGAGGATGAGAAGAGAACTGTTCAGCAAGATAGGGATCGTCTTTTGGCTGAAGTTGAAAATCTTGCTGCCGGTACTGATGGACAAACACACAAATCAGAGGATATCTATGCACAAAAATTAAAAGCACTTGAAGCCCAGATTGTGGATATGAAGAAGAAACAGGATAGCCAGGTTCAGCTTCTAAAGCAAAAGCAAAAAAGTGATGATGCAGCAAAGCGCCTGCAAGATGAAATACAATCTATAAAAGCTCAAAAGGTTCAATTGCAACAAAAAATAAAACAAGAGGCTGAACAGTTTCGACAGTGGAAGGCCTCTAGAGAGAAAGAGTTGTTGCAATTAAAGAAAGAAGGAAGAAGGAACGAGTTTGAAAGGCATAAGCTGCAAGCTCTAAATCAGCGCCAGAAAATGGTCCTTCAGAGAAAAACTGAGGAAGCTGCAATGGCCACCAAGAAGTTAAAGGAATTGTTAGAAGCTCGTAAATCTTCCAACCGAGACACATCAGTTACACTGAACGGGAGTGGAACAAATAAACAGAGCAATGAGAAGTCCTTGCAGCGTTGGCTTGATCACGAGCTAGAAGTCATGGTAAAAGAGCATGAAGTTCGTTTTGAGTATGAGAAGCAGAGCCAAGTGCGGGCTGCTCTTGCAGAGGAATTAGCAATGCTGAGACAAGTAAACGAGCTTGCTGCCAATGGTCTCAGTCCCCCAAAAGGGAAGAACGGATTTGCTAGAGCATTCTCCATGTCGCTAAATGCAAGAATGGCCAGAATAGCTTCACTGGAGAACATGCTGAGCATATCATCTAATTCACTTGTGGCAATGGCTTCTCAACTATCTGAGGCAGAAGAACGAGAACGGGCCTTCACTAACCGTGGACACTGGAACCAGTTGCGCTCAATGGGAGAAGCCAAAATTTTGCTTCAATATATGTTCAATTCTCTTGCAGACACTAGGTGTCAAATGTGGGAGAAGGACATGGAGTTAAGAGAAATGAAAGATCAAATCAGGGAACTTGTAGGTCTATTACGGCAAAGCGAAATCAAGAGAAAGGAAGTTGAGAAGGAACTAAAAGTGAGAGAGCAAGATGTTGCAAATGCATTGGCCAAGCCGGCTTCAGTAAATTCTCCAAATTCATTGAAACACTGTGCCGAAGACATAGCGGAACCTTTATCTCCGGATTCTGTGCCAGCACCGAAACAGCGCAAATATACACCAGGCATTGCAAATGGCCAAGTGAGGGAATCAGCAGCATTTATAGATCAAACTAGAAGGATGGTACCTATTGGGCAATTGTCGATGAAAAAACTAGCAATTGCAGGACAAGCTTCTGGCAAGCTATGGAGATGGAAAAGAAGCCATCATCAGTGGCTAATACAATTCAAATGGAAGTGGCAGAAACCTTGGAAACTTTCTGAACGAATTCGACACAGTGACGAGACAATCATGAGATCAAGGCCACGTTCACAGACTTTGCCTCAAATTAAGTCATTTTGA 3093 0.4242 MEAGEDCCVKVAVHVRPLINDEKLQGCKDCVTVVSGKPQVQIGAHSFTFDHVYGSNGSPSSAMFDECVASLVGGLFQGYNATVLAYGQTGSGKTYTMGTGSKDYYQTGIVPQVMSALFSKIETLKHQIEFQLHVSFIEILKEEVRDLLDPSSMNKSDTTNGHTGKVTIPGKPPIQIREASNGVITLAGSTEVSVATLKEMSACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKPTSPNENGLNDTMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGIHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPVVNRDPMSSEMLKMRQQLEYLQAELCTRSGGSSEEVQVLKERISWLEAANEDLCRELHEYRSRGSVAVQSDKDAYDGSLCNTKADGLKRSLPFTASDYPMTEATGDSREIEEVEKEWEHTLLQNSMDRELHELNKRLEQKESEMKLFGVSDAEAFKQHFGRKIMELEDEKRTVQQDRDRLLAEVENLAAGTDGQTHKSEDIYAQKLKALEAQIVDMKKKQDSQVQLLKQKQKSDDAAKRLQDEIQSIKAQKVQLQQKIKQEAEQFRQWKASREKELLQLKKEGRRNEFERHKLQALNQRQKMVLQRKTEEAAMATKKLKELLEARKSSNRDTSVTLNGSGTNKQSNEKSLQRWLDHELEVMVKEHEVRFEYEKQSQVRAALAEELAMLRQVNELAANGLSPPKGKNGFARAFSMSLNARMARIASLENMLSISSNSLVAMASQLSEAEERERAFTNRGHWNQLRSMGEAKILLQYMFNSLADTRCQMWEKDMELREMKDQIRELVGLLRQSEIKRKEVEKELKVREQDVANALAKPASVNSPNSLKHCAEDIAEPLSPDSVPAPKQRKYTPGIANGQVRESAAFIDQTRRMVPIGQLSMKKLAIAGQASGKLWRWKRSHHQWLIQFKWKWQKPWKLSERIRHSDETIMRSRPRSQTLPQIKSF* 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3660 1030 MobiDBLite consensus disorder prediction 690 715 - -
Tpr1g3660 1030 Coils Coil 403 423 - -
Tpr1g3660 1030 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-LIKE PROTEIN 2 1027 - -
Tpr1g3660 1030 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 394 IPR027417 -
Tpr1g3660 1030 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr1g3660 1030 PRINTS Kinesin heavy chain signature 216 233 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr1g3660 1030 PRINTS Kinesin heavy chain signature 259 277 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr1g3660 1030 PRINTS Kinesin heavy chain signature 313 334 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr1g3660 1030 ProSiteProfiles Kinesin motor domain profile. 8 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr1g3660 1030 MobiDBLite consensus disorder prediction 695 715 - -
Tpr1g3660 1030 ProSitePatterns Kinesin motor domain signature. 258 269 IPR019821 GO:0003777|GO:0005524|GO:0007018
Tpr1g3660 1030 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 2 1027 - -
Tpr1g3660 1030 Coils Coil 861 902 - -
Tpr1g3660 1030 CDD KISc_KIF4 7 364 - -
Tpr1g3660 1030 Gene3D Kinesin motor domain 2 391 IPR036961 -
Tpr1g3660 1030 SMART kinesin_4 6 371 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr1g3660 1030 Coils Coil 566 586 - -
Tpr1g3660 1030 Coils Coil 530 550 - -
Tpr1g3660 1030 Coils Coil 490 510 - -
Tpr1g3660 1030 Coils Coil 671 691 - -
Tpr1g3660 1030 Coils Coil 597 638 - -
Tpr1g3660 1030 Pfam Kinesin motor domain 15 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3660 Tpr-Chr1 40724746 40732916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3660 9 389 Miscellaneous Gene Families AT5G06670 36.573 1.51e-53 198
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3660 1 40724746 40732916 Tpr1g3660 1 40724746 40732916 ECH