Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3658 ATGATGAATAGCATCTTTGCAAAACTATTGTTCTTAACTTTGTGTATGCTCTTTGTGCTCAAAGCAGAATCTTTAGTATTTGCAGACCAAAGACTAAGTATAGTGTATCCAGTGATTCAAAAATTCAAGTCTTTGATTACTTCAGATCCATTAGGTGTTACAAAAACATGGATAGGTTCTGATATATGCAACTATAAAGGATTCTACTGTGATCATCCACCAGATAACAATTCTGCTATTGCTTTAGCCTCGATCGATTTCAATGGTTTTCGTCTAAGTGCTCCTACCCTTAATGGTTTTATTGATAAACTACCTGATATTGCACTTTTTCATGCAAATTCCAACAATTTTGTTGGCACAATCACTTCTCAAATCACTAAACTTCCTTATCTTTATGAGCTTGACTTAAGCAATAATCAATTTTCAGGTGCTTTTCCAATTGCTGTTCTTGGCATGAAAAGTTTAACATTTTTGGATATAAGGTTCAACTTTTTCTCTGGTGGTGTTCCACAACAAATATTCACACAAAATCTTGAAGTTCTTTTCATCAATAACAATCTCTTGACACAAACTTTGCCTGAAAATTTAGGCATAAGTTCAAGTACTCATATTTTTTTACTTACTTTGGCTAATAACAAATTTATGGGACCAATACCGAGAAATCTTCCGAAAGCTTTATCGAGTTTATCCGAGGTTGTTTTACTAAACAATGAGTTAACAGGTTGTTTACCACATGAAATTGGTTATTTTCAAGAAGCTATAGTTTTTGATGTTGGAAATAATCAACTTACTGGTCCTTTACCATTTTCACTTAGTTGTCTTGAGAAAGTTGAGGTTGTTAATTTGGCTAGTAACATGTTTTATGGAATGGTTCCAGAAGTTGTTTGTGCTGAGTTGGTGAATTTGGTGAATTTTTCTTTGGCAGATAATTATTTTACTCATGTTGGACCATTTTGTAGGATGTTGATACAAAGAGGTGTTCTTGATGTTGGAAAAAATTGTATTCATGATCTTCCTTTTCAAAGATCAATGGAAGAGTGTGTTGATTTCTATGCACAACCAAGGATGTGTCCTTTTATGTGGTTTCATAGTTTTATTCTTCCTTGTAAGTTTCCATTTCAAAAATCTTCTTCTGTTTCTTCTATTCCTTAA 1152 0.329 MMNSIFAKLLFLTLCMLFVLKAESLVFADQRLSIVYPVIQKFKSLITSDPLGVTKTWIGSDICNYKGFYCDHPPDNNSAIALASIDFNGFRLSAPTLNGFIDKLPDIALFHANSNNFVGTITSQITKLPYLYELDLSNNQFSGAFPIAVLGMKSLTFLDIRFNFFSGGVPQQIFTQNLEVLFINNNLLTQTLPENLGISSSTHIFLLTLANNKFMGPIPRNLPKALSSLSEVVLLNNELTGCLPHEIGYFQEAIVFDVGNNQLTGPLPFSLSCLEKVEVVNLASNMFYGMVPEVVCAELVNLVNFSLADNYFTHVGPFCRMLIQRGVLDVGKNCIHDLPFQRSMEECVDFYAQPRMCPFMWFHSFILPCKFPFQKSSSVSSIP* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3658 383 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 20 379 - -
Tpr1g3658 383 Gene3D Ribonuclease Inhibitor 200 348 IPR032675 -
Tpr1g3658 383 Gene3D Ribonuclease Inhibitor 37 199 IPR032675 -
Tpr1g3658 383 SUPERFAMILY L domain-like 38 336 - -
Tpr1g3658 383 PANTHER BNAA09G53810D PROTEIN 20 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3658 Tpr-Chr1 40716967 40718484 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3658 24 354 Leucine-rich Repeat extension Gene Families AT3G24480 41.994 1.64e-81 256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3658 1 40716967 40718484 Tpr1g3658 1 40716967 40718484 ECH