Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3655 ATGGAATATTTAGGCATTGATTTGAGCTGTGCAATTGGATCTCTTCGCAATGGAAGCATCCCTGACAAAGATTGTTTGCTTCCTCTTATTTCCAAACTCCTCGGTTACGCCATCGTCGCCGCTTCCACCACCGTCAAACTCCCTCAGATTTTGAAAATTTTACAGCATCGAAGTGTGAGAGGACTTAGTATGTTGTCGTTTGAGCTTGAAGTTGTTGGGTATACCATATCACTGGCTTACTGTCTTCACAAAGGCCTTTCTTTTTCGGCTTACGGAGAGTTGTTGTTTCTTTTGATTCAAGCATTTGTATTGGTTGCCATAATCTACTACTATTCTCGACCTCTGAGTACATTCACATGGATTCGGCCATTGATATATTGTGCCGTAGCACCCACAGTCTTAGCTGGTCAAATTGATCCTGTCCTCTTTGAGGCCTTGTATGCATCCCAGCATGCAATATTTCTGTTTGCAAGGATCCCACAAATATGGCAAAACTTTTCTAATAAAAGTACAGGGGAGCTCAGCTTCTTAACTTCTTTTATGAACTTTGGAGGCTCAATGGTTAGAGTATTCACCACAATTCAAGAAAATGCCCCAAGAAGCGTTCTACTGGGCTATGCAATTAGTGTTGCAACAAATTCTACCATCTTGAGTCAGATACTGATGTACCAAAAGCCTCAGGCCGCGAAAGAGAAGAAAGTGAAATAG 708 0.4181 MEYLGIDLSCAIGSLRNGSIPDKDCLLPLISKLLGYAIVAASTTVKLPQILKILQHRSVRGLSMLSFELEVVGYTISLAYCLHKGLSFSAYGELLFLLIQAFVLVAIIYYYSRPLSTFTWIRPLIYCAVAPTVLAGQIDPVLFEALYASQHAIFLFARIPQIWQNFSNKSTGELSFLTSFMNFGGSMVRVFTTIQENAPRSVLLGYAISVATNSTILSQILMYQKPQAAKEKKVK* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3655 235 PANTHER MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 PROTEIN HOMOLOG 1 2 228 - -
Tpr1g3655 235 PANTHER MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 LEC35 -RELATED 2 228 IPR016817 -
Tpr1g3655 235 SMART ctns 44 75 IPR006603 -
Tpr1g3655 235 SMART ctns 156 187 IPR006603 -
Tpr1g3655 235 PIRSF Mpdu1 7 235 IPR016817 -
Tpr1g3655 235 Gene3D - 150 234 - -
Tpr1g3655 235 Gene3D - 28 113 - -
Tpr1g3655 235 Pfam PQ loop repeat 151 199 IPR006603 -
Tpr1g3655 235 Pfam PQ loop repeat 30 89 IPR006603 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3655 1 223 Miscellaneous Gene Families AT4G07390 78.027 8.80e-133 372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3655 1 40683596 40689247 Tpr1g3655 1 40683596 40689247 ECH