Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3641 ATGGCGTCAAGTTTTGATCGGTGGGAAAAAGATCCATTCTTTAACGCTGCCGAAGAAGTTCAGGAATCTGCAGATAGGATGGAATCGACATATAGGACATGGTTACATGCCACCAAAGATAGTTCTAGCATGTGGAACCCTAATGAACTCCGAAGAGATTTACTTACTACCCTTGGTACTGCTAAATGGCAGTTGGAGGAATTTGAACGCGAAGTTAAGTCAAGTTATAGCAAAAACCTAGGTAATGATGCAAGAAGAACTAGGCACCAAGATTTTATCACAGCTATTGATGAAAAGATAAAAAAAGTTGAGCATTCGTTAAATGAATCGAGTCCTTCGGATGGCAAGGAATCTAAGCCATGGGTGTGTTTGGACGAAGAAGAAAAAGATGAGCTCGCTTTCTTTCTTTCAGGAATGCCACTAGCAGCTGAAAGCAACAATCCAAAATTATGTGATAAGAATTCAGTTTCACCTGGTGTTGGTGAAGAAAAGGAGGTATCACGTGGGATTCGTAGGGTAGCTAGTGCTAGTGCTGATATTAGTAGTTGGAAAATTTCAGTTTCCGATGATCCGCAGCAGTTGAGTTCCTCCAGTGGTTCGTCTGGTGCAATGCATAAGGTGCCTAGTTTATCAGGATTTTTTAGTTCCGTGGAATCTATCTCCAAATTGAAGTGGCCTAAGAATGGTTATGGTTATAGAAAACTGAAAACAGTGGAGCATCATAAAGAAACTGATAGTGCACAAATTCCAATGGCTGAATTGAATAGAGGCACCAATGCATTCTATGAAAGAAGTAAAAGTAGCCATGATAGTTCCGACGAATGGTATGACAAGCAACTCTATGGATGGTGTGGTGCTATTCAGAGACAGCTTCAAAGATCTCAATACCAAATACAATACAGTCGGCTTGCTCGAGTAACAGTTTCAATTTTTTTTCTCCTTTGCTTGATTGTTTTAATTTCATTTCACACAATGTAG 978 0.3988 MASSFDRWEKDPFFNAAEEVQESADRMESTYRTWLHATKDSSSMWNPNELRRDLLTTLGTAKWQLEEFEREVKSSYSKNLGNDARRTRHQDFITAIDEKIKKVEHSLNESSPSDGKESKPWVCLDEEEKDELAFFLSGMPLAAESNNPKLCDKNSVSPGVGEEKEVSRGIRRVASASADISSWKISVSDDPQQLSSSSGSSGAMHKVPSLSGFFSSVESISKLKWPKNGYGYRKLKTVEHHKETDSAQIPMAELNRGTNAFYERSKSSHDSSDEWYDKQLYGWCGAIQRQLQRSQYQIQYSRLARVTVSIFFLLCLIVLISFHTM* 326
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3641 325 Pfam Syntaxin 6, N-terminal 11 104 IPR015260 GO:0016020|GO:0048193
Tpr1g3641 325 PANTHER EXPRESSED PROTEIN 1 323 - -
Tpr1g3641 325 SUPERFAMILY t-snare proteins 10 109 IPR010989 GO:0016020|GO:0016192
Tpr1g3641 325 Gene3D - 9 111 - -
Tpr1g3641 325 PANTHER OS05G0443700 PROTEIN 1 323 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Tpr1g3641 Tpr-Chr1 40556905 40560624 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3641 1 40556905 40560624 Tpr1g3641 1 40556905 40560624 ECH
Tpr1g3641 1 40556905 40560624 Tpr7g0869 7 7682712 7685707 PCT