Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3640 ATGAAGATTTTCAACTCTTTTCCAATTGTTCTACTGCTAATATTCTGCACCATACACATAACAGTAGCACAAACCAAAACACCACAAACCAAAAACACATACATAATTCACATGGACAAATCAACCATGCCAGAAACATTCACTGATACCGATCACTTTAACTGGTTCGATACATCGCTAAAATCAGTATCCGAAACAGCAGAGATTCTCTACACTTACAAGCACATAGCTCATGGATTCTCAACAAGGCTAACAAGCCAAGAAGCTGAAACACTTCTTAAACAACCAGGAATTCTCTCTGTTATCCCTGAACTTAAATACCAACTTCACACAACAAGAACACCAGAGTTTCTCGGATTGCCGAAAACAAACACTCTTTTACCTAATTCAAAACAATTCAGTGAGGTTATTATTGGTGTTCTTGACACTGGTATATGGCCAGAGCTAAAAAGCTTAGATGACACAGGACTTGGTCCAATACCAAGGAGTTGGAAAGGCGAATGCGAAACCGGTAACAACTTGAATTCATCAAATTGCAACAGAAAACTGATTGGTGCAAGGTTTTTCTCAAAAGGGTATGAAGCAACACTTGGTCCTATTGATGAAACAACAGAATCAAGATCAGCTAGAGATGATGATGGACATGGAAGTCATACCTTAACAACAGCAGGTGGTTCTGAAGTAGCAGAAGCTAGCTTATTCGGTTTAGCTTCTGGTACTGCAAGAGGCATGGCTACACAAGCGCGTGTCGCGGCATACAAAGTGTGTTGGCTTAGTGGTTGTTTCACTTCAGATATAGCTGCTGGAATCGATAAAGCTATTGAAGATGGTGTTAATGTCTTATCGATGTCAATTGGTGGTAGCCAAACAGAATACTATAGAGACATCATTGCAATTGGTTCTTTCACAGCAATGTCTCATGGAATTCTAGTTTCTGCTTCAGCAGGAAACGGTGGACCAAGTGCCGAAAGCTTGTCCAACGTAGCACCGTGGATAACAACAGTCGGAGCAGGAACAATTGATCGCGATTTTCCATCTTATATATCACTTGGAAATGGAAAAAATTACACTGGTGCATCACTTTACAATGGAAAACCTTTACCTGATTCATTGCTACCACTTGTTTATGCAGGTAATGTTACAAATTCCTCAGTTGGGTATCTTTGTATACCTGATTCATTGATAAGTTCAAAAGTTGCCGGCAAAATTGTGATATGTGAAAGAGGTGGAAACTCAAGAGTTGAAAAGGGTCTAGTAGTAAAAACTGCTGGTGGAGTTGGAATGATTTTGGTTAACGGTGAAGAGTATGGTGAAGAGTTAATTGCTGATCCTCATCTTATTCCAGCAGCAGCATTGGGTCAAAAATCAGGCACAATTCTAAAAGACTACGTTTTTGCTACGAAAAATCCAACGGCTAATATTGTTTTTGGTGGTACACACTTGCAAGTTCAACCTTCACCAGTGGTAGCAGCATTCAGTTCAAGAGGACCAAACGGCTTAACACCACAAATTCTTAAACCGGATATAATAGCTCCGGGTGTAAACATACTAGCCGGTTGGACCGGTTTAGTTGGACCAACCGGTTTAACACTTGACAAAAGGTACGTGAGTTTCAATATTATATCAGGAACTTCAATGTCATGTCCTCACGTGAGTGGTTTAGCTGCGATAGTTAAAGGAAGTCACCCTGAATGGAGCCCTGCTTCTATACGGTCGGCGCTAATGACCACTGCATACACCTCATACAAAACCGGACAAACAATTCAAGATGTTGCAACCGGGAAACCGGCTACTCCCTTTGATTTTGGATCAGGACACGTGGATCCTGTATCAGCCCTTGATCCTGGCCTTGTTTATGATCTCAGCGTCGATGATTATCTTGGGTTTTTTTGTGCTTTAAACTACACGTCATTTCAAATCAAAATTGTTGCAAGAAGAGAATTCACGTGTGCCAAGAAATATCGGCTTGAAGACTTTAACTATCCTTCTTTTGCTGTTGCTTTGGAAACTGCTTCGGGAGTTGGTGGTGGTTCAAATAAACCGGTAACAGTTGAATATAATAGGGTTCTCACGAATGTTGGAACTCCAGGAACATATAAAGCTTCTGTGGTGGTGGAATCTTCGTCAGTGAAGGTTGTGGTTGAACCGGAGATTATTACTTTTAAGGAAGTGAATGAGAAGAAGGGTTATACGATTCGGTTTATTTCTGGTTCGATGCCTTCTGGAACGAAGGGGTTTGGTTATTTGGAATGGAATGATGGGAAGCATAGGGTTAGAAGTCCAATTGCTTTTAGTTGGACTTGA 2304 0.4084 MKIFNSFPIVLLLIFCTIHITVAQTKTPQTKNTYIIHMDKSTMPETFTDTDHFNWFDTSLKSVSETAEILYTYKHIAHGFSTRLTSQEAETLLKQPGILSVIPELKYQLHTTRTPEFLGLPKTNTLLPNSKQFSEVIIGVLDTGIWPELKSLDDTGLGPIPRSWKGECETGNNLNSSNCNRKLIGARFFSKGYEATLGPIDETTESRSARDDDGHGSHTLTTAGGSEVAEASLFGLASGTARGMATQARVAAYKVCWLSGCFTSDIAAGIDKAIEDGVNVLSMSIGGSQTEYYRDIIAIGSFTAMSHGILVSASAGNGGPSAESLSNVAPWITTVGAGTIDRDFPSYISLGNGKNYTGASLYNGKPLPDSLLPLVYAGNVTNSSVGYLCIPDSLISSKVAGKIVICERGGNSRVEKGLVVKTAGGVGMILVNGEEYGEELIADPHLIPAAALGQKSGTILKDYVFATKNPTANIVFGGTHLQVQPSPVVAAFSSRGPNGLTPQILKPDIIAPGVNILAGWTGLVGPTGLTLDKRYVSFNIISGTSMSCPHVSGLAAIVKGSHPEWSPASIRSALMTTAYTSYKTGQTIQDVATGKPATPFDFGSGHVDPVSALDPGLVYDLSVDDYLGFFCALNYTSFQIKIVARREFTCAKKYRLEDFNYPSFAVALETASGVGGGSNKPVTVEYNRVLTNVGTPGTYKASVVVESSSVKVVVEPEIITFKEVNEKKGYTIRFISGSMPSGTKGFGYLEWNDGKHRVRSPIAFSWT* 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3640 767 ProSiteProfiles Serine proteases, subtilase domain profile. 106 613 - -
Tpr1g3640 767 SUPERFAMILY PA domain 373 435 IPR046450 -
Tpr1g3640 767 SUPERFAMILY Subtilisin-like 109 617 IPR036852 GO:0004252|GO:0006508
Tpr1g3640 767 CDD PA_subtilisin_like 347 474 - -
Tpr1g3640 767 Gene3D - 341 481 - -
Tpr1g3640 767 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 22 765 IPR045051 -
Tpr1g3640 767 Pfam PA domain 373 458 IPR003137 -
Tpr1g3640 767 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 110 IPR037045 -
Tpr1g3640 767 MobiDBLite consensus disorder prediction 200 222 - -
Tpr1g3640 767 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 22 765 - -
Tpr1g3640 767 Gene3D Peptidase S8/S53 domain 136 626 IPR036852 GO:0004252|GO:0006508
Tpr1g3640 767 Pfam Fibronectin type-III domain 658 763 IPR041469 -
Tpr1g3640 767 CDD Peptidases_S8_3 107 579 IPR034197 -
Tpr1g3640 767 PRINTS Subtilisin serine protease family (S8) signature 133 152 IPR015500 -
Tpr1g3640 767 PRINTS Subtilisin serine protease family (S8) signature 211 224 IPR015500 -
Tpr1g3640 767 PRINTS Subtilisin serine protease family (S8) signature 542 558 IPR015500 -
Tpr1g3640 767 Pfam Peptidase inhibitor I9 33 110 IPR010259 -
Tpr1g3640 767 Pfam Subtilase family 135 603 IPR000209 GO:0006508|GO:0008236
Tpr1g3640 767 ProSitePatterns Serine proteases, subtilase family, serine active site. 543 553 IPR023828 -
Tpr1g3640 767 Gene3D - 630 766 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3640 Tpr-Chr1 40553405 40556564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3640 6 767 Subtilisin-like Serine Gene Family AT5G67360 61.749 0.0 979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3640 1 40553405 40556564 Tpr1g3640 1 40553405 40556564 ECH
Tpr1g3640 1 40553405 40556564 Tpr7g0867 7 7674442 7677303 PCT