Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3639 ATGGAGCTTGTAACTGCAAGTGATCTTCTCGTAACTGCATCTGTGGCACTTCTTATTTCATTCATCGTTGCAAAACTTGTTTCCTTTGCCACCACCGACACTCATGTTCATGTTCATCACCAACCGGTTGGTCCGGTTCATCGAGTTGAAAACCGGTTGACGGTTCACTCACCTCAAAGAAAGAGCCGAACCGGTTTTATTACTCCGGTTCATGTTACTGCAATAGCGAAGAATTTAGAAACCGAACATGATAATACTAGAGACGCTACGGTTGTGTCCGATTCAAATGTTGCCGGTGAGTTACCACCGACAAAATCGGACGTAAGAGACGCTACGGTTGATTCCGGTTCCAACGTTACCGGCGAGTTACCGCTGACAAGTTCAGACGTAACAGAGGCTAAGGTTGATTCCGGTTCTAACGTTGCTTTCGAGTTACCGGCGACAAACTCAGACGAAACAGAGACTAAGGTTGATGATTCCGGTTCCAAAGTTGGTGTCGAGTTGACGCCGATAAGCTCAAACGAAGTAGATACTAAGGTTGAATTCCATTCCAACGTTGTTGGTGATTTTTCGAAAGAAGAAACCGTCGTGAAAAGTGGTGATTCTGTTGAACGGAGGAACGATGAAGTTGTGGAAGAAATGATTGAAGAAAAATCAACTGAGAAGGTTGATGATGAAGATGAAGATGAAGATGAAGATGAAGATGATTGGGAATGGGAAGGGATTGAGAGGAGTGAGGTGGAGAAGATGTTTATGGAGGCTACAGAATTTGTTGGTGAGAAAGGGTATATTGGTAATTGTGATGATGATTTGGAGATGGAGTTGTATGGACTTCATAAGGTTGCTATGGAAGGACCTTGCCGTGAATCTCAACCAATGCCACTTAAACTCTCTGCACGTGCTAAATGGAATGCTTGGCAAAAGCTGGGGAACATGAGTCCAGAGGTTGCGATGGAGCGATATATCAGCCTTCTTTCAGATAAATTTCCCGAATGGATGAAGAATACTTCTGCTGGAATAACTGAAGAGAAACCCACAGGATCAGAAGTTTCGGAGTCTGGTGCTACTAATTCGAGCTCAGCTTTGTCTCATCAACAAATAATCTTAACCGAAAGGGAACTTGTTCAAGAGTTTGGTGCCCCGAAGCTTATCCCAGATACAGAGTCAGATTCGGAGAACAATGTTAAGAAATGA 1194 0.4372 MELVTASDLLVTASVALLISFIVAKLVSFATTDTHVHVHHQPVGPVHRVENRLTVHSPQRKSRTGFITPVHVTAIAKNLETEHDNTRDATVVSDSNVAGELPPTKSDVRDATVDSGSNVTGELPLTSSDVTEAKVDSGSNVAFELPATNSDETETKVDDSGSKVGVELTPISSNEVDTKVEFHSNVVGDFSKEETVVKSGDSVERRNDEVVEEMIEEKSTEKVDDEDEDEDEDEDDWEWEGIERSEVEKMFMEATEFVGEKGYIGNCDDDLEMELYGLHKVAMEGPCRESQPMPLKLSARAKWNAWQKLGNMSPEVAMERYISLLSDKFPEWMKNTSAGITEEKPTGSEVSESGATNSSSALSHQQIILTERELVQEFGAPKLIPDTESDSENNVKK* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3639 397 SUPERFAMILY Acyl-CoA binding protein 247 333 IPR035984 GO:0000062
Tpr1g3639 397 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 247 334 IPR000582 GO:0000062
Tpr1g3639 397 MobiDBLite consensus disorder prediction 340 364 - -
Tpr1g3639 397 Pfam Acyl CoA binding protein 249 325 IPR000582 GO:0000062
Tpr1g3639 397 MobiDBLite consensus disorder prediction 212 237 - -
Tpr1g3639 397 MobiDBLite consensus disorder prediction 219 237 - -
Tpr1g3639 397 PANTHER ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 3 96 360 - -
Tpr1g3639 397 Gene3D - 242 349 IPR014352 -
Tpr1g3639 397 PANTHER ACYL-COA-BINDING PROTEIN, ACBP 96 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3639 Tpr-Chr1 40536759 40541183 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3639 214 330 Acyl Lipid Metabolism Gene Families AT4G24230 52.991 2.51e-34 129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3639 1 40536759 40541183 Tpr1g3639 1 40536759 40541183 ECH