Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3633 ATGGAGAATCTTGTAGACACAAAAGATAAACGACACCATAGAGAAACCACCGCATCAGAGTCACCACTCTCTTCCACCACCACCATGTCCTCCTCCATTGACCAACCTACGAAGAAGCGAAAGCTCCACGACTCTCCGGAAACTACCGCCCCCTTTCTGCAAACCCTACCTGCTCCTCCGCCGTTATCTCAAGATGAAATTCTCGCAAAACGCAGAAACAAAGACGCAATTCGAAACGTTTTCGAAGTTTACAAACGAATTAAACGTTGCCTCATTCAGAAACCAGTTCCCTCCACATCTGACCTTGACCAGAGCTTTCTTGCTCTCATCGCTTCTTCCAGAGGTTGTATGAGTGTACAGAGAATTGTGGCCGATTTAATTCCTCGATATGCTTGTCACTGTCCAAAAGCTTTGGAAGCCGCAACTAAAGTGGTTATCAATATGCATAACTGGAGTTTGGCTTTGATCAGTAAGGAAGAGGATTCCAGTGGTATTGCATTTGAAACTGCTAAAGCTTGTATTTTTGGATTGGCTGATATTTGCCGCATTGCTTCTTCAGTAGCACCAACATCAGCTGTAATTAGAGGAATTCGCTCAGCAGTTTTTCAAAATGTGCTCACCTTTTTTGTTGCGTTATTTGAGGGAAAGGATGTATCAAAGATGATTGACAAGAATTTCCTGAATATGCAAGATAAACCTGAGGTCTTTTCTGAATTGAAACAAAAGGTTTTAGATGAAGATGATTCTTCATTGACTAAATTGTCTAAGTTTCATACATTATGTATACTTTGGGTATTCTTCTCTTGTCCAAAAGAACTGCTTGCAGCTTGTTTGGAACTCTTACGCTCCGCCACAAACGAGGGAACTTCTAACGAAGGGCAACGTTTTATGAGTATGGTGACTAGCTTGCTTAATGATTATGAATCAGTTCTCCCTTTGGGCAGAGAAAACGATGGACCTAAATCATGTACCGCTTCTATTGGGCAAGGCATCAAAGAGATTGAGGTTGGCGAAAAAGTTATCACCGATGACAACCATATATCCGATGGTATTCGAAAGAGCTGTTTGCTTATGCTGGTTCTTAACAAGGACCCCTCACTGCGGAAATGGACTCTACGTCGATGTAAGAAGTTACTTGACTCACTCACTGATGCTTCACTGGAAACTACATCAATATTGCAAGGAATTCTTGGAATGTTCGCACAACAGACAGAGGTAGAAGACTGTCAAGTAGATAGTGATGAAGACAAGTCTGATTCTTTAATTTTCATGAATAGAAACTATGTGGTTCCTAGGATCTCTGAGGAACATGAAAGTATTGGTGAAACATCACAAAAAGGTTCTCATTTTGATAATGGAGGGGTATCAAGGTCTGTGGGCATTGAGAAAGGTGACATGCCTAATGTTAGATGTTCCACACCTAGGGACTCTGCAAACCATCAGATATTCTCACCTACAGTTAGAACAGCAGTAGACTATAGGAGTAATTCATTTGAAGGTAGAAATGATTTCCCAACTGTCGAGAAAAATCAAGTTTCGAATATGAATTTCAATTCACCTCTGTCGAGGTCCTCTAGTGGAGCTGTCAGCAATGTTTTGGCTTCTCCTAATCACCATTTTATGTCACCGTCTTCTTTAGCCAAAAGTCAAATTGTTTGGTGCGGTGATGGGGATCCTGCTGCTGTTGATATTGTTGCTGCTTCTAAGCAGCTATGGGTAGGTTGTGTAGCACCTGACATGCCCGAAAGCCATATTAGGTTTCAAATAGAGAGGTTTGGTCCTGTTGAAAAGTTTATATTCTTCCCATTGAAAGGATTTGCTTTAGTTGAGTACAGAAGGATAATTGATGCGATAAAAGCTCGACACTATGCACCTGGAAATTTTCCTTGCCGTGTAAAGTTCATGGACATAGGACTTGGTACTAGGGGTGCAATGAATGGTGTTGCAATTGGCTCTAGTTTTCATATTTATGTTGGAAATATTTCCAGTCAATGGGCCAAGGATGAGATTCTTCATGAATCAAGGAAAGTAGTTTATAAAGGTCCTCTCACAGTGATTGATCTTAGCTGTGAGTTTGCATTACTTATGGAGTTTGAAACCCCTGAAGAAGCTGCCTCCGTCATGTTGCATCTGAGACAGTTCCGAAGAGAAAGAAGTAATTATAACCCGCATTTTGGTCCAGGAACAGTTAATGTTGTATCACCTCATTCTCGAACTTTACCTGGGAGCCCTGCTGAGAGCAGTCGAACAAGAATGTCTCACTTGGGTAACATACTATCTTCATTGCGTGCAAAGTATAATATTAATCAAAACATAGTTCTCCATGATAATTATATTACTGGAAATAGTTGTGCTTCTTCCATGCGTGAGGAAGATACAGTGCCATCCAGCACTCTTTGGATAACTATTCCTCATAGTAGTTCCCAGTTCCTCACAGATGATGAGCTAATGAGTATTTGCAACCTTGCTATTGGAAACTCTGGTTCCATTGCACGGTTAACACAAGCAAAAATGCACATGGGAGATGGTTGGTTTGTTGAATGTAGTAATGTTGATGGTGCAGTTTCCATCTTAAAGAATCTGCGTGCTTGTCCAGGATTGTTCTTCCAAATAGAATTCAGCAAACCGGGAAATCAGAATGCTGTACCGTTTTCAATTAAACCTGAAAACCATGCTATGGAGCTTGTTTCCCCCAGACTAAATGCTGAGAATCATGGCAGTGGAGTACATGGTGCACCTCTGTCTCAGTCAAATCGGCACTTCCCTGATTCAAGGGAGATATCAGAAGTTGGAGGAAGGAAACCTGATGGCTATAATCATTTATCACTGGATCCTCATCAAGGAGGAAATGTTCCACATGTATACTCTGGAGCACATGGACCTTCCATTCCACCACCACAACAAATTCAGTCATCTCCTTTCACCCGCCCTGTTTATGTTCCTCCAAATGGGCCATGGGATCCCCATGGCATAAATAATCAGTTACCTGTCAACCAATTCCAGACAGGAGTAATGCCAAATAATTTTAACGGCAGTCCTTTTATACCTGCTTCAGTAGCTCCAGTTGGTCAGATACAAGGAACTCCAATGCAACCCTATAACCAACAGATTCCTCCGTCAATTGTACCACCACCTTTGGCATCTTTGCCACCTCCTCAGCCTGAAATGCCATCTCTTCATCCGCATCCTTCTTCTCTCCCACCTCTACCCCAGACACAACCACCCTTGGTTCCTCCACCACCTGGTTCTCCTCCTCCACCTCCTCCACCACTGCCTGTCCAAGAACCGGTCAATATGGAATGTTCGGGGCAGACACTGCAGTATCAATGGCAGGGCAATCTCTGTAAAAGTGGAGTTAGCTACTGTACAATTTATGCATGCAGAGCAGATTCAGATATTTGCAGATATTCGAATACCACACCCGAGCCTTCCGAATGGCCCACCAAATTAGACATGACTAAACGGACAGATTTTCGACATGTGCAAACAACATTTGCTGCCACTCCATCTCATAGAAGGGAAGTGTGCCGTTTAATCCCATCTTCCACAAGTGACGACAGAAGGTTTCAGGATTTCGTATCATATTTAAAACAGAGGGATTGTGCTGGAGTTATTAAAATCCCAGGTTCAAAATCCATATGGGCAAGGCTGCTATTTATACTTCCTCATTCACTTGAAATGTGCTCGATGCTTTCTATTGCACCCGATCCATCTGATTGCCTAATTGCTTTAGTCTTACCCAAAGAAACAAACTTTGAGTGGATGTGA 3768 0.423 MENLVDTKDKRHHRETTASESPLSSTTTMSSSIDQPTKKRKLHDSPETTAPFLQTLPAPPPLSQDEILAKRRNKDAIRNVFEVYKRIKRCLIQKPVPSTSDLDQSFLALIASSRGCMSVQRIVADLIPRYACHCPKALEAATKVVINMHNWSLALISKEEDSSGIAFETAKACIFGLADICRIASSVAPTSAVIRGIRSAVFQNVLTFFVALFEGKDVSKMIDKNFLNMQDKPEVFSELKQKVLDEDDSSLTKLSKFHTLCILWVFFSCPKELLAACLELLRSATNEGTSNEGQRFMSMVTSLLNDYESVLPLGRENDGPKSCTASIGQGIKEIEVGEKVITDDNHISDGIRKSCLLMLVLNKDPSLRKWTLRRCKKLLDSLTDASLETTSILQGILGMFAQQTEVEDCQVDSDEDKSDSLIFMNRNYVVPRISEEHESIGETSQKGSHFDNGGVSRSVGIEKGDMPNVRCSTPRDSANHQIFSPTVRTAVDYRSNSFEGRNDFPTVEKNQVSNMNFNSPLSRSSSGAVSNVLASPNHHFMSPSSLAKSQIVWCGDGDPAAVDIVAASKQLWVGCVAPDMPESHIRFQIERFGPVEKFIFFPLKGFALVEYRRIIDAIKARHYAPGNFPCRVKFMDIGLGTRGAMNGVAIGSSFHIYVGNISSQWAKDEILHESRKVVYKGPLTVIDLSCEFALLMEFETPEEAASVMLHLRQFRRERSNYNPHFGPGTVNVVSPHSRTLPGSPAESSRTRMSHLGNILSSLRAKYNINQNIVLHDNYITGNSCASSMREEDTVPSSTLWITIPHSSSQFLTDDELMSICNLAIGNSGSIARLTQAKMHMGDGWFVECSNVDGAVSILKNLRACPGLFFQIEFSKPGNQNAVPFSIKPENHAMELVSPRLNAENHGSGVHGAPLSQSNRHFPDSREISEVGGRKPDGYNHLSLDPHQGGNVPHVYSGAHGPSIPPPQQIQSSPFTRPVYVPPNGPWDPHGINNQLPVNQFQTGVMPNNFNGSPFIPASVAPVGQIQGTPMQPYNQQIPPSIVPPPLASLPPPQPEMPSLHPHPSSLPPLPQTQPPLVPPPPGSPPPPPPPLPVQEPVNMECSGQTLQYQWQGNLCKSGVSYCTIYACRADSDICRYSNTTPEPSEWPTKLDMTKRTDFRHVQTTFAATPSHRREVCRLIPSSTSDDRRFQDFVSYLKQRDCAGVIKIPGSKSIWARLLFILPHSLEMCSMLSIAPDPSDCLIALVLPKETNFEWM* 1256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3633 1255 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 29 1255 - -
Tpr1g3633 1255 Pfam SPOC domain 1104 1246 IPR012921 -
Tpr1g3633 1255 MobiDBLite consensus disorder prediction 1 57 - -
Tpr1g3633 1255 Gene3D - 560 642 IPR012677 -
Tpr1g3633 1255 PANTHER NUCLEIC ACID BINDING PROTEIN 29 1255 - -
Tpr1g3633 1255 SUPERFAMILY RNA-binding domain, RBD 556 628 IPR035979 GO:0003676
Tpr1g3633 1255 SMART rrm1_1 570 633 IPR000504 GO:0003723
Tpr1g3633 1255 MobiDBLite consensus disorder prediction 19 35 - -
Tpr1g3633 1255 MobiDBLite consensus disorder prediction 905 926 - -
Tpr1g3633 1255 MobiDBLite consensus disorder prediction 1 18 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3633 1 40470815 40478763 Tpr1g3633 1 40470815 40478763 ECH