Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3619 ATGCTCTTTCCTTCTTTCATTCCCACTCAAAATTCTCATAACAACGAGAATCATTCCATAGCATCAAAAGAAGAATCTTCCATATCCAATCACACCCAAAACTCTATTTATTTATTCATTCACAAAGCTCTTCAATTATTCAATTCAATTCAATTCAATTATTCAATTCAATTCAATTCAATGGCGAAGAATCTCAATCACCCAATTGTAGAAGACTCACTTTCATTCACCGATTTTCCCGAAGATATTCAGCTATGCATCCTTTCGTTTCTGGGTCCCACTGAAATCGCTACGTTCGCCTGCACCTCTAAGCAATTCGGAACACTCTGTTCCACCGATTCAAAGCTATGGTTCACCCTTTGCGATCGAAAATGGGGTTCCAAAACCCAAATCTCCAAATGGGGAAAAGGGAAAATCACCTACAAACATCTCTATCATACTCTTCATGAATGGGATAATCTCATTGGTTTCTGGCGTCGTAGCGGTCCTGGAAGTTCTGTGATTTCGTCTCCTTCGTTGGTTTTCTTCGAGTGGGGTGAATCGTTTATTTCTGGTTCTAGGGTTTCACCTTTTCAATCTGGAAATGAGATGATTTCTGGGTATGAAGTTAAAAAGGTACCTTTTTTGAAAATGGGTATTTCTGAAGATGGACAATTTGTTAATCTTTTGGATCCTGATGGTAGAGCTGATTTGAATTTGGAATTTGGTGATAATGGGTTGAATGAATTGATTCCTGTCAATGTTTGTTTTATGGGGAATACTCATTTTGTTCTGGAGGAGAATTTGTTTGGGAGAAATTCTAGCAGTGGTGAAGATTGTGGTTTTGGTGGAGAGGATTGGATTGGGGTTAGGAGTGCAAGTGGATCTCCGCCAGATCGGTTGATGTTGGAGATTTATCAGCATTTGGCAAACCGGGTTAGTCCTGGAAGCGATCGATCGAGGAAGCAGAGGAGGAAGGAGAAGGAAAGGATGGCTAGGAGGAAATGGGAGCCTGAGCATTTTGTCAAGATTGTGAATTGCTCCCCAACAGCGTCACGGCCTTTGCAAGGTCTTTGGAAGGGAATTTGTGCAGACATGAGTTTAGCATTTTACCTTGTGGCTTATGATGAAATTGGGGGCATTGCCTGCCGACGACTTGGGGATCCTCCTCCACGTTTCTCTACTTATGCTCCGGTTTTCTGGACATCCAATGCTACCTTTCTGGAATCTCCTTTTTCTCTGGAGGAAGAATCTCTGTATGACAGTCGCATTCATCTTCAACCAGTTCAACCACACAATGAAAACCACGAGCAGTTCCATATGTCAGACATTGAAGGGGTAAATCACATTCAGCAGTTCCATTTGTCAGACAAGGAAGCCGTAAATGGAATTCTTCACATAAACTCAAGTTATGATTTAGTTATTGCAGACCTTGCTGGAGCAATAAATCCAAAGAGTGCTGAGGGAAGGATTTGGCAGTACCAGGATGGTACTTTTGGATTTGGATTCATTCGTGACAACTTTGTCATAGACATGAAAAATATTGTCCGTGATGGTTGTGTCGTGGATGCAGTTAACTCTTCTTCTGATTGA 1572 0.4141 MLFPSFIPTQNSHNNENHSIASKEESSISNHTQNSIYLFIHKALQLFNSIQFNYSIQFNSMAKNLNHPIVEDSLSFTDFPEDIQLCILSFLGPTEIATFACTSKQFGTLCSTDSKLWFTLCDRKWGSKTQISKWGKGKITYKHLYHTLHEWDNLIGFWRRSGPGSSVISSPSLVFFEWGESFISGSRVSPFQSGNEMISGYEVKKVPFLKMGISEDGQFVNLLDPDGRADLNLEFGDNGLNELIPVNVCFMGNTHFVLEENLFGRNSSSGEDCGFGGEDWIGVRSASGSPPDRLMLEIYQHLANRVSPGSDRSRKQRRKEKERMARRKWEPEHFVKIVNCSPTASRPLQGLWKGICADMSLAFYLVAYDEIGGIACRRLGDPPPRFSTYAPVFWTSNATFLESPFSLEEESLYDSRIHLQPVQPHNENHEQFHMSDIEGVNHIQQFHLSDKEAVNGILHINSSYDLVIADLAGAINPKSAEGRIWQYQDGTFGFGFIRDNFVIDMKNIVRDGCVVDAVNSSSD* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3619 523 Pfam F-box domain 77 114 IPR001810 GO:0005515
Tpr1g3619 523 SUPERFAMILY F-box domain 72 151 IPR036047 GO:0005515
Tpr1g3619 523 MobiDBLite consensus disorder prediction 305 325 - -
Tpr1g3619 523 MobiDBLite consensus disorder prediction 308 325 - -
Tpr1g3619 523 Gene3D - 57 153 - -
Tpr1g3619 523 ProSiteProfiles F-box domain profile. 73 120 IPR001810 GO:0005515
Tpr1g3619 523 SMART fbox_2 79 120 IPR001810 GO:0005515
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3619 1 40358392 40360713 Tpr1g3619 1 40358392 40360713 ECH