Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3031 ATGGGTGTTCTTGATAAACTATCAGATTATTTCTCTGTTTCCACAACAACTGGAAAGAGACGCAAACCAATGCAGACAGTTGAAATCAAGGTGAAAATGGACTGTGATGGTTGTGAAAGAAGAGTTAGGAATTCTGTTGCTCATATGAAAGGTGTGAAGCAAGTGGAGATAAATAGAAAGCAAAGCAAGGTAACAGTTAGTGGTAATGTTGACAGAAACCGGGTGTTAAAGAAAATACAGAACACTGGAAAAAGAGCAGAATTTTGGCCTTATATTCCCTACAATTTGGTGGCTTATCCTTACATATCACAAGCATATGATAAAAAGGCACCAGCTGGTTATGTGAAAAACTCAATGCAAGCATTCTCTAGTCCAAATGCAATGGATGAGAAACTCACTAACATGTTTAGTGATGAAAACCCTAATGCATGTTCCATCATGTAA 444 0.3739 MGVLDKLSDYFSVSTTTGKRRKPMQTVEIKVKMDCDGCERRVRNSVAHMKGVKQVEINRKQSKVTVSGNVDRNRVLKKIQNTGKRAEFWPYIPYNLVAYPYISQAYDKKAPAGYVKNSMQAFSSPNAMDEKLTNMFSDENPNACSIM* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3031 147 Gene3D - 12 89 - -
Tpr1g3031 147 Pfam Heavy-metal-associated domain 30 84 IPR006121 GO:0046872
Tpr1g3031 147 PANTHER HEAVY METAL TRANSPORT/DETOXIFICATION SUPERFAMILY PROTEIN 2 147 - -
Tpr1g3031 147 CDD HMA 28 87 IPR006121 GO:0046872
Tpr1g3031 147 ProSiteProfiles Heavy-metal-associated domain profile. 33 88 IPR006121 GO:0046872
Tpr1g3031 147 SUPERFAMILY HMA, heavy metal-associated domain 23 90 IPR036163 GO:0046872
Tpr1g3031 147 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 2 147 IPR045181 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3031 Tpr-Chr1 34730257 34733406 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3031 1 34730257 34733406 Tpr1g3031 1 34730257 34733406 ECH