Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3017 ATGATAACACTAAAAGATCTATACACTGTCTTAACAGCAGTTGTTCCATTATATGTTGCTATGATCTTAGCCTACGGTTCTGTCCGTTGGTGGAAGATTTTTTCGCCCGATCAATGTTCCGGTATAAACCGATTTGTCGCGGTTTTCGCCGTCCCTCTTCTTTCTTTTCACTTTATCTCAACCAACAATCCATACCAAATGAACTTCAGATTCATAGCAGCAGACACACTTCAGAAAATCATCATGCTAATCGCGCTTTCGCTATGGACAATGTTCACTAAAAATGGTAATTTAGAATGGATGATAACAATTTTCTCATTATCAACACTTCCAAATACTTTGGTTATGGGAATTCCTTTGTTAATTGCTATGTATGGTGATTACTCTGGAAGTTTAATGGTTCAAGTTGTGGTTCTTCAGTGTATCATTTGGTACACACTTTTACTCTTTCTTTTTGAGTATCGTGGTGCTAAGCTTTTAATCATGGAACAGTTTCCGGAAACTGCAGCTTCGATTGTTTCGTTTAAAGTTGATTCGGATGTTATGTCGTTAGACGGAAGGGATTTTCTTGAGACTGATGCATCTGTTGGTGATGATGGGAAGTTACATGTTACCGTTAGGAAATCTAACGCGTCGCGGAGGTCATTCATGATGAATACTCCACGACCGTCAAATTTGACTGGAGCTGAGATTTACAGTCTCAGCTCCACGCCAAGAGGGTCAAATTTTAACCATCAGGAGTTTTACTCCATGATGGGCTATCAACCAAGGCATTCCAATTTTGGTACTAATGATTTGTATTCAGTTCAGTCTTCGTCTCGAGGACCGACTCCTAGACCGTCAAATTTCGAAGAACAAGGTGGAAGTTCTCCTAGATTTGGGTTTTATCCGGCACAAACTGCGCCTGCTTCGTATCCGGTGCCTAATCCGGAATTCTCCTCTACTACTAAAACTGTGAAAAGTCAGAGCCAAAATTTGGTGCAGCCACAGCAACAAGTTTCATTGCAGACAAAGGGCTCTCAGGATGCTAAGGAATTGCATATGTTTGTGTGGAGCTCAAGTGCTTCGCCGGTTTCGGAAAGTGCTGGTCTCAATGCATTCCGAAATTCGGAACAATCGGAGGAGGGTGCTAAAGAGATCAGGATGGTGGTTCCTGATGAACATAATCAAAATGGTGAAACCAATAACAAAGGTGGTCAAGAAGGTGAACTTGGTGGGGAAGAGAATTTCAAGTTCAATGGAGTTAAGGGAGGAGAACAAGTCGGAGAAGGGCCCAATGGGCCTAATAAGTTGGACTCGAATTCAACGGCAGAGATTCACCCTAAAGCTACCGGAGTTGCTGATTCCGGTGTCGGAAAACTTATGCCTCCGGCGAGCGTCATGACCCGACTCATACTTATTATGGTTTGGAGGAAGCTTATCCGTAATCCCAACACTTATTCAAGTCTCATTGGTCTCATATGGTCCCTTGTTTCCTTTAGGTGGGATGTTCATATGCCAAAAATAATAGAGAAATCAATTTCCATACTGTCTGATGCTGGTCTTGGAATGGCTATGTTCAGCTTAGGTTTGTTCATGGCCCTTCAACCCAAGATAATTGCATGTGGGAATTCTATTGCTTCATTTGCAATGGCCATTAGATTTCTTACTGGTCCAGCTGTTATGGCAGCTGCTTCTATCGCCGTTGGCCTCCGTGGCACTCTCCTACATGTTGCCATTGTTCAGGCTGCACTTCCACAAGGGATTGTTCCATTTGTGTTTGCAAAAGAGTACAATGTCCATCCAGCCATTCTTAGTACAGCGGTTATTTTTGGAATGTTGATAGCCCTTCCAATTACTCTTCTCTACTACATTCTCCTTGGTTTGTAA 1869 0.4248 MITLKDLYTVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAVFAVPLLSFHFISTNNPYQMNFRFIAADTLQKIIMLIALSLWTMFTKNGNLEWMITIFSLSTLPNTLVMGIPLLIAMYGDYSGSLMVQVVVLQCIIWYTLLLFLFEYRGAKLLIMEQFPETAASIVSFKVDSDVMSLDGRDFLETDASVGDDGKLHVTVRKSNASRRSFMMNTPRPSNLTGAEIYSLSSTPRGSNFNHQEFYSMMGYQPRHSNFGTNDLYSVQSSSRGPTPRPSNFEEQGGSSPRFGFYPAQTAPASYPVPNPEFSSTTKTVKSQSQNLVQPQQQVSLQTKGSQDAKELHMFVWSSSASPVSESAGLNAFRNSEQSEEGAKEIRMVVPDEHNQNGETNNKGGQEGELGGEENFKFNGVKGGEQVGEGPNGPNKLDSNSTAEIHPKATGVADSGVGKLMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLIWSLVSFRWDVHMPKIIEKSISILSDAGLGMAMFSLGLFMALQPKIIACGNSIASFAMAIRFLTGPAVMAAASIAVGLRGTLLHVAIVQAALPQGIVPFVFAKEYNVHPAILSTAVIFGMLIALPITLLYYILLGL* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3017 622 Pfam Membrane transport protein 9 617 IPR004776 GO:0016021|GO:0055085
Tpr1g3017 622 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 622 - -
Tpr1g3017 622 MobiDBLite consensus disorder prediction 269 289 - -
Tpr1g3017 622 TIGRFAM 2a69: auxin efflux carrier 1 622 IPR014024 -
Tpr1g3017 622 MobiDBLite consensus disorder prediction 269 288 - -
Tpr1g3017 622 PANTHER AUXIN EFFLUX CARRIER-RELATED 1 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3017 Tpr-Chr1 34579537 34584639 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3017 1 622 Organic Solute Cotransporters AT1G70940 75.117 0.0 915
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3017 1 34579537 34584639 Tpr1g3017 1 34579537 34584639 ECH