Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3014 ATGGAAGATCTTCCACAAGGTTACCGTCCCAACGTTGGTGTCTGTCTCATCAACTCTGATGATCAGATATTTGTGGCTTCTAGATTGAATGTTCCAGGAGCATGGCAAATGCCTCAGGGAGGTATTGAAGAAGGTGAAGAACCGAAATCTGCTGCTATTAGAGAACTTCGAGAAGAAACTGGAATTGTATCAGCCGAGATAATTGCTGAGGTTGATAAATGGTTGACATATGACTTCCCTCCTGCTGTGAAGGCTAAAGTCAATCGTCTCTGGGGAGGTGAATGGCACGGACAAGCGCAGAAATGGTTTCTCATGAGATTAACAAAAGATGAGGGTGAAATCAACTTAGCTACCGGTGAAGCAGACCCCGAATTTGCAGAGTGGAAATGGGCAAACCCTGAAGAAGTTATTGAGCAGGCGGTGGACTACAAGAGACCAACCTATGCAGAAGTTGTAACAACCTTCATGCCTTACTTTCAAGGAAATGCAATATCTGCAAAATGTAAATCAACAAAGTGGTGA 522 0.4387 MEDLPQGYRPNVGVCLINSDDQIFVASRLNVPGAWQMPQGGIEEGEEPKSAAIRELREETGIVSAEIIAEVDKWLTYDFPPAVKAKVNRLWGGEWHGQAQKWFLMRLTKDEGEINLATGEADPEFAEWKWANPEEVIEQAVDYKRPTYAEVVTTFMPYFQGNAISAKCKSTKW* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3014 173 Pfam NUDIX domain 8 149 IPR000086 -
Tpr1g3014 173 ProSiteProfiles Nudix hydrolase domain profile. 7 153 IPR000086 -
Tpr1g3014 173 Hamap RNA pyrophosphohydrolase [rppH]. 1 160 IPR022927 -
Tpr1g3014 173 SUPERFAMILY Nudix 7 156 IPR015797 -
Tpr1g3014 173 ProSitePatterns Nudix box signature. 40 61 IPR020084 GO:0016787
Tpr1g3014 173 CDD Ap4A_hydrolase_plant_like 7 155 IPR022927 -
Tpr1g3014 173 PANTHER UDP/ADP-SUGAR PYROPHOSPHATASE 1 173 - -
Tpr1g3014 173 PRINTS NUDIX hydrolase family signature 35 49 IPR020476 -
Tpr1g3014 173 PRINTS NUDIX hydrolase family signature 49 64 IPR020476 -
Tpr1g3014 173 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 1 159 - -
Tpr1g3014 173 PANTHER BNACNNG74470D PROTEIN 1 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3014 Tpr-Chr1 34546722 34549398 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3014 1 34546722 34549398 Tpr1g3014 1 34546722 34549398 ECH