Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2816 ATGATGGAAAGGGAAAATTGGAACGAGAATATCAATGGGTATTATGGGAATCAATTATTGCGTGATTATGATCGAGATTCAGTTACTATACATTCTTCTTCGTCACCATCTCCACCAAGACTTGGTTACATTGAACATCGTGTATCAAAATTTGATACTTTGGTTGGCATTGCAATCAAATATGGTGTTGAGGCTACAGACATCAAAAGGATGAATAATCTTGTTACAGACCATCAGATATTTGCACTTCAAACAGTTCAAATTCCATTACCTGGAAGGCATCCTCCATCTCCTTGTTTATCAAATGGTTCAACTACTCCAGCAAATGGTATCTCGACTCACCTACCACCTGATGATGCGAGCCGTGAGCTGCTTGAATCATTTCAGTCCATAAAAGTAAAGTCTCACGACCGGAAGGTTTCCCCTGCCATGAGTTCATTACAGGGTTATTATGGACTTCCAGCTCTCTCTAATTCTTCAGAAAACGATTCTACCATGTGTGGACGGCCCCTGAGTCGTCAACGAAAATCCAGAAGTTTGGTCAATGTAATTTTGCAAGAGATTATGGATAAGGGTGATACTTCACCAGCTTCAGAAACCGGCGAACTTAGCTCTGATAAATGGAATGACAAGTTTGCCCAGAGGCGTCAGAAATCGGTAGCTGACTTTACTAGGATACCGGAGTTGATTCTGAGGGAGGATAATAGCAGCAATGGTGCCCTTCCTTCAAGAACAGGAAAGGGCTTAGCTTTGAGACAGAAAGCAGCCAGCCGAAATGCAGCGGCAAATGATTCTGAATCAAGTTCGCCTGTGGCAATGGTTATGGGGGATGGTTTTCAAACTGAAAGTTCATCTGGTGTAAGGAAATCATCCAGTACATCTTGTTTGCAAGATCAGGATAACTGCGGCTCCTCATCCATTTGGCCATCATGGAAACCAGATTTACAGGCCCTTTCAAGTGCAGCCATCGGAAAACCAATCTTTGATGGCTTACCAAAGCCAATAACTAGTCGAAGGAATAAAGCTGCACTTGATTAA 1038 0.4249 MMERENWNENINGYYGNQLLRDYDRDSVTIHSSSSPSPPRLGYIEHRVSKFDTLVGIAIKYGVEATDIKRMNNLVTDHQIFALQTVQIPLPGRHPPSPCLSNGSTTPANGISTHLPPDDASRELLESFQSIKVKSHDRKVSPAMSSLQGYYGLPALSNSSENDSTMCGRPLSRQRKSRSLVNVILQEIMDKGDTSPASETGELSSDKWNDKFAQRRQKSVADFTRIPELILREDNSSNGALPSRTGKGLALRQKAASRNAAANDSESSSPVAMVMGDGFQTESSSGVRKSSSTSCLQDQDNCGSSSIWPSWKPDLQALSSAAIGKPIFDGLPKPITSRRNKAALD* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2816 345 MobiDBLite consensus disorder prediction 189 210 - -
Tpr1g2816 345 CDD LysM 44 88 IPR018392 -
Tpr1g2816 345 Gene3D LysM domain 30 95 IPR036779 -
Tpr1g2816 345 MobiDBLite consensus disorder prediction 278 307 - -
Tpr1g2816 345 ProSiteProfiles LysM domain profile. 44 88 IPR018392 -
Tpr1g2816 345 SMART LysM_2 45 89 IPR018392 -
Tpr1g2816 345 PANTHER LOC443603 PROTEIN-RELATED 27 345 IPR045030 -
Tpr1g2816 345 MobiDBLite consensus disorder prediction 325 345 - -
Tpr1g2816 345 MobiDBLite consensus disorder prediction 235 307 - -
Tpr1g2816 345 SUPERFAMILY LysM domain 44 89 IPR036779 -
Tpr1g2816 345 PANTHER PEPTIDOGLYCAN-BINDING LYSM DOMAIN-CONTAINING PROTEIN 27 345 - -
Tpr1g2816 345 Pfam LysM domain 46 89 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2816 Tpr-Chr1 32329108 32332084 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g2816 1 32329108 32332084 Tpr1g2816 1 32329108 32332084 ECH