Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2811 TTCAACCTCACATCATCTTCATTCTACACTTCAAACATGTCTTTAACCACATTAAACTTGTTTTCTCACATCCTCTTACTTTTAAAAAATATTCAACTCAATGAGATTATTATTGCATCCATAGTTTTCATAATCCTTCATTCCTTGCGATCCAAGAAACAACATGGCCTAATCAATTGGCCTATCTTTGGAATGCTACCTGCATTACTCATTGGACTCAAAACCAGTAATATGTATGAAAGACTAACTAATATACTTATACAACAAAATGGAACCTTTAGATTCAAAGGACCATGGTTCACTGGTCTCAACTTGGTAGTAACCTCGGAACCGCAAAATGTAGAACATCTTCTCAAAACAAGGTTCACTAATTTCCCTAAAGGAAACTTTGTTAAAGACACAGTTTCTGATTTACTCGGAGACGGTATTTTCGCTGTAGATAATGAAACATGGCAGAAACAAAGAAAAACAGCGAGTATCGAGTTTCATTCAACAAAGTTTAGGAAATTAACAATTGAGTCATTGTTTGAGCTTGTGAATAATAGGCTCATACCTGTCTTAGATTCATCTTTGAAGAAATCGGTTTCGATCGATCTTCAAGATATTTTGTTGAGATTAACTTTTGATAATGTTTGTATGATTGCTTTTGGTGTTGATCCTGGTTGTTTACAACCTAATTTACCTGTAATACCTTTTGCAGCAGCTTTTGAAGATGCAACAGAAGCTATTTTGCTTCGATTTCCGTCGCTGGCTTGTGTATGGAAAACTATGAGGTTTCTTAACTTAGGTATGGAAAGAAAGTTAAAGAAATCAATACAAAAAGTTGATGAATTTGCTGAGAATGTTATAAGGGAAAGAAAGAAAGAACTATCTTTGGAAAATGAACATGATGACGATGATGATACGCGAAAATCGGATTTGTTAACTGTGTTTATGAGGCTTAAAGATGAGAATGGAATGGCTTATTCAGATAAGTTCTTGAGGGATATATGTGTGAATTTTATATTAGCTGGAAGGGATACTTCTTCTGTTGCTTTAAGCTGGTTTTTCTGGTTGATTGATCAGAATCATGAAGTGGAGGAGAGAATATTAGAAGAGATTTGTAGGGTTGTGAGTGAGAGAGAGGAGATTAAGAAGGAAGAATTTGATAATAATTGTTTGAGATTCATGCCTGAGGAGATTAAGAAAATGGATTATTTGCATGCTGCTCTTTCAGAAGCTCTTAGATTGTATCCTTCTGTGCCTATGGACCATAAGGAGGTGGTAGAAGATGATACATTCCCAGATGGAACAGAACTAAAAAAAGGAACAAAAGTGATATATGCAATATATTCAATGGGAAGAATGGAAAGCATATGGGGAAAAGATTGCTTGGAGTACAAGCCAGAAAGATGGTTAACTAAAGAAGGTAATTTCATGAGTGAATCTGCATACAAATTCACTGCTTTTAATGGAGGACCAAGATTATGTTTAGGCAAAGATTTTGCATACTATCAAATGAAATATGTTGCAGCTAGCATTATATTTCATTACCATGTTAAGGTTGTTGAGAATCACCCTATTGTTCCTAAGCTTTCATTGACACTTTACATGAAGCATGGATTGAAAGTTAATCTTCATAGGCGTTGTGATGAAGAGATTGGTAAATATTTGAAGTTTAGTTAG 1665 0.3459 FNLTSSSFYTSNMSLTTLNLFSHILLLLKNIQLNEIIIASIVFIILHSLRSKKQHGLINWPIFGMLPALLIGLKTSNMYERLTNILIQQNGTFRFKGPWFTGLNLVVTSEPQNVEHLLKTRFTNFPKGNFVKDTVSDLLGDGIFAVDNETWQKQRKTASIEFHSTKFRKLTIESLFELVNNRLIPVLDSSLKKSVSIDLQDILLRLTFDNVCMIAFGVDPGCLQPNLPVIPFAAAFEDATEAILLRFPSLACVWKTMRFLNLGMERKLKKSIQKVDEFAENVIRERKKELSLENEHDDDDDTRKSDLLTVFMRLKDENGMAYSDKFLRDICVNFILAGRDTSSVALSWFFWLIDQNHEVEERILEEICRVVSEREEIKKEEFDNNCLRFMPEEIKKMDYLHAALSEALRLYPSVPMDHKEVVEDDTFPDGTELKKGTKVIYAIYSMGRMESIWGKDCLEYKPERWLTKEGNFMSESAYKFTAFNGGPRLCLGKDFAYYQMKYVAASIIFHYHVKVVENHPIVPKLSLTLYMKHGLKVNLHRRCDEEIGKYLKFS* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2811 554 Gene3D Cytochrome P450 52 551 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2811 554 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 483 492 IPR017972 GO:0005506|GO:0016705
Tpr1g2811 554 SUPERFAMILY Cytochrome P450 58 542 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2811 554 Pfam Cytochrome P450 75 527 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2811 554 PANTHER CYTOCHROME P450 86B1-LIKE 21 544 - -
Tpr1g2811 554 PRINTS E-class P450 group I signature 52 71 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2811 554 PRINTS E-class P450 group I signature 326 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2811 554 PRINTS E-class P450 group I signature 346 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2811 554 PRINTS E-class P450 group I signature 401 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2811 554 PRINTS E-class P450 group I signature 480 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2811 554 PRINTS E-class P450 group I signature 490 513 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2811 554 PANTHER CYTOCHROME P450 21 544 - -
Tpr1g2811 554 PRINTS P450 superfamily signature 337 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2811 554 PRINTS P450 superfamily signature 402 413 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2811 554 PRINTS P450 superfamily signature 481 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2811 554 PRINTS P450 superfamily signature 490 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2811 Tpr-Chr1 32236918 32239271 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2811 20 550 Cytochrome P450 AT5G23190 66.667 0.0 743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g2811 1 32236918 32239271 Tpr1g2811 1 32236918 32239271 ECH