Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1186 ATGGTATGTCAAGGATTTACTTCAAATGGGACCAAACCTTCATTGGTCATTTTTGCCATAGCTATCTCTCTACTCATATTAACATTCACTTTTGGTCATTTTGAGTGGTTTTCAATTATACTAAATGGAAGAGATCTAAATGTGACAACTGAAGATTTGCAAACCAAGAATTGTACAGAGTCGTATGTTGGTTCAAAAAACAGTTCATCACCATCAACAGAAACTGATGCTGACAAACTCTTAGATGGGCTTCTCTCTTCTGAATTTGATAAAGAATCATGCTTAAGCAGATTTCAAGCTTACTTATACCACAAGGTATCGCCTCATAAACCTTCTCCGTATCTCATATCAAAACTGCGTAGCTATGAAGATCTTCACAGAAGATGTGGACCTCATAGTAAAGCTTACAAGAGAACCATGGCAAAGCTCAATAGATTCAAATCCAAGAAATCCAATGTTACTAATGCTACTGGATCATGTAAGTACATAGTATGGACTGCTGCCAATGGCTTAGGGAACAGAATGGTGAGCATGGCTTCAATATTCCTATATGCAATCCTCACCGATCGAGTCCTACTTGTAGAGTTTCTTGATGACATGGTTGGCCTATTTTGTGAACCATTCCCCAATTCATCATGGATATTGCCTAAAGATTTTCCTTTTAGTGACAACAGAAAAGTTGAAATATATGAAAGCATGCTAAAAAGGGACAAGGAAAACACCTCAAAGAAGTTACTATTACCATCGACGATAGGAGTACGTCTCAATATGTATCATCATGATCATGAATTTTTTTTCTCTTGTGATCATAACCAACATCTTCTACATAAATTACCTCTCTTGATTGTAACATCAGATCAATATTTTGTACCATCTCTTTTTATGGTTCCGTCGTTTAAACAAGAGCTTAACAAAATGTTCCCAACCAAAGACACGGTTTTTCATCATTTGGGACGTTACCTATTTCTCCCTTCAAACGATGTATGGGGACCGATCAAAAGATTCTACCAAGCATATTTAGCCAGTGCAGAAGAGAAGATTGGAATCCAAATAAGAGTATTTCATCCTAACCGCACATCATATGAAACAATCATGGGTCAAGTTTTGAAATGCACCCAAAATCACACGATACTACCTGGTTTTGCAACAAATATTTCAAAAGACCCTCCATTGAAAAATCAGATTTTGAAGTCTGTTTTGGTAACATCATTATATCAAGAATATGGTGAGAATCTCAGGACTATTTATTTGAACAATCCAACCGTCACAGGTGAAATCATAGGAGTTTATCAGCCAAGTCATGAAGATCAACAAAAATTTGGTGATAATTTGCACAACAAGAAAGCATTGACAGACATCTATCTATTAAGTTTGTGTGATGTTTTAGTAACTAGCTCAGTATCAACTTTTGGGTATGTGGCTCAGGGTTTGGGAGGCATAAAGCCATTGGTTCTTCGAAAATTACAAGACAACAAAATCCCGGATTCGCCTTGTGTGCAAGATTTCTCTATGGAGCCTTGTTTTCATAAAACTCCTAAACTTGATTGCATGGAAAAGCCCATAGATAATATGGCCACAATTTTTCCTTACGTGAAGAAATGTGTTGATTATAGAAGGGGTGTCAAGTTGGTCAATGATATTCTATAG 1647 0.3655 MVCQGFTSNGTKPSLVIFAIAISLLILTFTFGHFEWFSIILNGRDLNVTTEDLQTKNCTESYVGSKNSSSPSTETDADKLLDGLLSSEFDKESCLSRFQAYLYHKVSPHKPSPYLISKLRSYEDLHRRCGPHSKAYKRTMAKLNRFKSKKSNVTNATGSCKYIVWTAANGLGNRMVSMASIFLYAILTDRVLLVEFLDDMVGLFCEPFPNSSWILPKDFPFSDNRKVEIYESMLKRDKENTSKKLLLPSTIGVRLNMYHHDHEFFFSCDHNQHLLHKLPLLIVTSDQYFVPSLFMVPSFKQELNKMFPTKDTVFHHLGRYLFLPSNDVWGPIKRFYQAYLASAEEKIGIQIRVFHPNRTSYETIMGQVLKCTQNHTILPGFATNISKDPPLKNQILKSVLVTSLYQEYGENLRTIYLNNPTVTGEIIGVYQPSHEDQQKFGDNLHNKKALTDIYLLSLCDVLVTSSVSTFGYVAQGLGGIKPLVLRKLQDNKIPDSPCVQDFSMEPCFHKTPKLDCMEKPIDNMATIFPYVKKCVDYRRGVKLVNDIL* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1186 548 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 57 546 - -
Tpr1g1186 548 Pfam Xyloglucan fucosyltransferase 65 516 IPR004938 GO:0008107|GO:0016020|GO:0042546
Tpr1g1186 548 PANTHER FUCOSYLTRANSFERASE 2-RELATED 57 546 IPR004938 GO:0008107|GO:0016020|GO:0042546
Tpr1g1186 548 Gene3D - 331 490 - -
Tpr1g1186 548 Gene3D - 157 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1186 Tpr-Chr1 10687631 10690645 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1186 73 544 Xyloglucan Fucosyltransferase1 AT2G03220 49.163 4.41e-161 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1186 K13681 - gmx:100799776 551.977