Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1071 ATGATTCTCTTCTTCACCTTCTTATTATCCATCATCACTACCACCATCTCCACCTCCACTCCAACCCGATCTCCCCCGTCCTTTCTCTACGGTAATTTGTCCTCTTACCACATTAACTGCGGCACTTCAACTAACACAACTGACAACTTCAACACAACATGGCTCTCCGACCGTTACTACACCGGCGGCTCAACCTCCGTCGTATCGGAGCCACTCCGTTTCAACCTCCCATCGGAAAAAACTCTCCGCTACTTCCCTTCTTCTTCCAACGGTAAAAAAAACTGCTACTCTTTCCCCTCTCTTCCCTCATCTCGTTACCTTCTTCGTACTTTCACCGTCTACGATAACTACGACGATAAGTCTCGTCCTCCTTCATTCGACGTCGCACTCTCCTCCACCATCATTTTCAACTGGCGTTCTCCATGGCCTGAATCGAGTTCTCGCGACGGTGCTTACTCTGATCTCTTTGCCTTTCTCGCCACTCCTTCTACCGCCGATCTTTGCTTTTACGGTTTCGCTACCGATGCTCCGATTGTTTCTTCAATCGAGCTTGTTCCTGTTGATTCTTCTTCATACGATTCTCTCTCCACCGGAGAAAATGTTATTTTAGTTAACTACGGTAGAATTTCATGCGGTTCTGATGATCATTTCGGTCCTGGTTTCACCAACGACAGTGACAAATTCGGCCGGTCATGGCAACCGGACGAAGCATTCCGAATCGGATCGGAAATAGCGGTTCGAGGTTTGTTAACGGAGAATACAGTTAACGGTAGTGATAAAGAACCGAATTATTTTCCGATGAAGCTTTATCAAACGGCTGTGACGTCAGAGGAGGATGAATTGGAGTACGAATTGAGTGTGGACGCGAAGATGGACTATATGGTGTGGCTGCATTTTGCTGAGATTGATTCTAGAGTGAAAAAAGAAGGAGAAAGAGTGTTTGATGTGTTCATCAATGGAAACAATGTAACAAGAATTGATATATACAAAGAAGTGGGAAGTTTTACTGCTTTTACTTGGCATTATACTGTTAGAAATTTGAGTAGTAATGTTTTGGGGATTAAGCTTGTAGCTGTTTCTGGTGCTCCTTTGATTAGTGGTTTTGAGAATTATGCATTGGTGCCTAATGAACCTTCAACTCACCCTCTTCAAGTAAGTGCAATGAAGGCATTGAAGGAATCGCTTCGTGTTCCGGGTAGAATGGGATGGAATGGTGATCCTTGTGCTCCTACAACTTGGGATGCTTGGGAGGGTGTTACTTGCCGTATGAGTGACGATAAAACTGCTCTCCTCATTACTGAAATAAATCTTGGCAGTCAAGGCTTAAAAGGGAACATCAGTGACCAGATTAGTCTTTTATCAGACTTAGTAATCCTGAACATGAGTTCTAATTCCTTGCGAGGCGAAATACCATCAGGACTAGGTCAAAAGTCCCTGATTCAAGTGGATTTATCCAATAATCAGTTAACCGGCTCTATACCTGACAGTTTGGCATCTTCGAATCTGCAGCTTGTGCTATTGAATGATAACCTATTGGAAGGACGAGTACCAGAGCAACTTTATTCTGTTGGCGTGCATGGTGGAGCTATCGATCTCTCTGGCAACAAGGGTTTGTGCGGTGCACCATCTCTACCATCATGTCCTATGTTTTGGGAGCATGGGAGATTATCGAGTCCGGGTAAAATTGCAATAGGCTTGTCATGTCTTTTTGTTTTCTGCGTGGTACTGCTGCTGGTATATATCTACATCAGAAGGAAAAGGAACGATTATGACTTTGGTCTACCCCATGAAATAACGGCTCTAGCGGCGAAGAGAAACAAATATCAGAGACAGAAATCGTTGATGCTTCTTGAGCTGGAGAGTCAACACGCTAGGGGATTCCCTTCACCTTTTACTCCACAATAA 1905 0.4425 MILFFTFLLSIITTTISTSTPTRSPPSFLYGNLSSYHINCGTSTNTTDNFNTTWLSDRYYTGGSTSVVSEPLRFNLPSEKTLRYFPSSSNGKKNCYSFPSLPSSRYLLRTFTVYDNYDDKSRPPSFDVALSSTIIFNWRSPWPESSSRDGAYSDLFAFLATPSTADLCFYGFATDAPIVSSIELVPVDSSSYDSLSTGENVILVNYGRISCGSDDHFGPGFTNDSDKFGRSWQPDEAFRIGSEIAVRGLLTENTVNGSDKEPNYFPMKLYQTAVTSEEDELEYELSVDAKMDYMVWLHFAEIDSRVKKEGERVFDVFINGNNVTRIDIYKEVGSFTAFTWHYTVRNLSSNVLGIKLVAVSGAPLISGFENYALVPNEPSTHPLQVSAMKALKESLRVPGRMGWNGDPCAPTTWDAWEGVTCRMSDDKTALLITEINLGSQGLKGNISDQISLLSDLVILNMSSNSLRGEIPSGLGQKSLIQVDLSNNQLTGSIPDSLASSNLQLVLLNDNLLEGRVPEQLYSVGVHGGAIDLSGNKGLCGAPSLPSCPMFWEHGRLSSPGKIAIGLSCLFVFCVVLLLVYIYIRRKRNDYDFGLPHEITALAAKRNKYQRQKSLMLLELESQHARGFPSPFTPQ* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1071 634 Gene3D - 34 188 - -
Tpr1g1071 634 Gene3D - 206 372 - -
Tpr1g1071 634 SUPERFAMILY L domain-like 384 522 - -
Tpr1g1071 634 Pfam Malectin-like domain 38 372 IPR024788 -
Tpr1g1071 634 Gene3D Ribonuclease Inhibitor 384 548 IPR032675 -
Tpr1g1071 634 PANTHER DI-GLUCOSE BINDING PROTEIN WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEIN 17 634 - -
Tpr1g1071 634 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 17 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1071 Tpr-Chr1 9615506 9621133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1071 40 614 Receptor kinase-like Gene Family AT2G14440 26.182 7.85e-34 136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1071 1 9615506 9621133 Tpr1g1071 1 9615506 9621133 ECH