Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1059 ATGATGAAGTGCATTAAAGCTATGATTAGTAGTTTCATTTTGGTTATGATTATTTTCTCTATGAATGAAAAATGCTATGGACAAGAAGAAGATTCTTATGGTGTTACTCCAATGGAGAAAACAGAGTTGAATGCTCTGTATTCTGCAATTCAAGGTTTTGTTGGTAATTCATGGAATGGCTCAGATCTCTATCCAGATCCTTGTGGTTGGACTCCTATTCAGGGAGTTTCTTGTGATATATTCAATGGACTTTGGTATGTAACAGTAATCAACATTGGACCTATTCATGATAATTCACTAGTTTGTGTTAATGATAATTTGGAATTTAAGCCAGAATTATTTCAGCTTAAGCACCTTAAAGTTCTATCATTCTTCAACTGTTTTCAATCACCAAATAGTCTTCCGGTCTCAATTCCGACTGAAAATTGGGAGAATCTTGCTGAAAACGTAGAATCCATAGAGTTTAGATCAAATCCTGGTCTCATTGGTAACATTCCTTCAAGTTTTGGTTTACTCAAGAATCTTCAATCATTGGTATTACTAGAAAATGGTTTATCAGGTAAAATACCTCAAGAAATTGGAAATCTTGTGAAATTGAAGAGATTAGTTCTTTCTGGAAACAATTTTAGTGGCAATATTCCAGATGTTTTTGGAGGGTTAAGTGATTTGTTAATCCTTGATTTAAGCAGAAATTCATTATCTGGAAATTTGCCTATAACAATTGGAAGATTAAGTTCAGCATTGAAGATTGATTTAAGTCATAATTTTCTTGAAGGGAAGTTGCTTAATGAATTTGGTAATCTTAAGAATTTGACACTTATGGATTTAAGGAATAATAGATTATGTTGTGGATTGGTTTCATCTTTACAAGAAATGAATTCATTGGAAGAAATGGTTTTATCAAATAATCCATTAGGTGGTGATATAAGGAACTTAAATTGGAAAAATCTTCAAAATTTGGTGATTTTGGAACTCTCTAACATGAATTTGACAGGTGAAATTCCTGAGTCATTATCAGAATTAAAGAAATTGAGATTTTTGGGACTTAATGATAACAACCTTACAGGTAAGCTATTACCAAAGCTAGAATCACTTCCTTCTCTTAATGCACTTTACTTAAGTGGAAATAATTTCAAAGGAGAAATTCAATTTTCAAAAGGGTTTTTTGGGAAATTGGGAAGACGTTTTGGTGCTTGGAGTAATCCTAAACTTTGCTATCAAGTTGGAGTAATGTCAACAAAAAATGTTCCTTATGGAGTAAAGCCATGCCATGACCAAGAAGAGGTTCATTTGGTAAAATCAAATGCCAAAAATGAGATCATCAATGGTGATATCAACAATAATTCCAATTCCATAGTCTCTATGGGATTTTCTTGTTCTACTACTAGTGGAAATTTCTGGTGGGCTTTTATGATTTTGGGTTTAGTACATAGTTTTTTAATTTAG 1446 0.3223 MMKCIKAMISSFILVMIIFSMNEKCYGQEEDSYGVTPMEKTELNALYSAIQGFVGNSWNGSDLYPDPCGWTPIQGVSCDIFNGLWYVTVINIGPIHDNSLVCVNDNLEFKPELFQLKHLKVLSFFNCFQSPNSLPVSIPTENWENLAENVESIEFRSNPGLIGNIPSSFGLLKNLQSLVLLENGLSGKIPQEIGNLVKLKRLVLSGNNFSGNIPDVFGGLSDLLILDLSRNSLSGNLPITIGRLSSALKIDLSHNFLEGKLLNEFGNLKNLTLMDLRNNRLCCGLVSSLQEMNSLEEMVLSNNPLGGDIRNLNWKNLQNLVILELSNMNLTGEIPESLSELKKLRFLGLNDNNLTGKLLPKLESLPSLNALYLSGNNFKGEIQFSKGFFGKLGRRFGAWSNPKLCYQVGVMSTKNVPYGVKPCHDQEEVHLVKSNAKNEIINGDINNNSNSIVSMGFSCSTTSGNFWWAFMILGLVHSFLI* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1059 481 Pfam Leucine rich repeat 198 255 IPR001611 GO:0005515
Tpr1g1059 481 Gene3D Ribonuclease Inhibitor 214 312 IPR032675 -
Tpr1g1059 481 Gene3D Ribonuclease Inhibitor 313 409 IPR032675 -
Tpr1g1059 481 Gene3D Ribonuclease Inhibitor 40 213 IPR032675 -
Tpr1g1059 481 PANTHER PIRIFORMOSPORA INDICA-INSENSITIVE PROTEIN 2-LIKE 6 479 - -
Tpr1g1059 481 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 6 479 - -
Tpr1g1059 481 SUPERFAMILY L domain-like 39 382 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1059 247 401 Receptor kinase-like Gene Family AT3G11080 30.573 2.66e-09 57.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1059 1 9394519 9397638 Tpr1g1059 1 9394519 9397638 ECH