Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1053 ATGAGTGAAGAATGTGGTGGTAACACTATTGCTACATCTACTACACCATTAAATTGGTGGTATCTTCAAGCTTCAAATTCTCTTTCTTCTAATTGGAATGATGTTAATAAACATGCATGGAACAATCAAATAAATAATCCTAATTCTTCCTCTTCTTGTGAGGATCAAGATATATCTGTTTCTTCTACATCATTCACGAATGCTTCCAATCATTCAAGTCTCACCGTTGAATCATCTCGAAGAGTGTTCGTTGAGCCGCATGCACCACCTTCCTCCAACGACTTCATGGCCGAACATGCTTCGGATAACCAACTTTGGAGTCATGTTCTATCAGGTGTTGGATCAAATGGAGAGTTACACAACAACCAAGAAATTGGAGAGAATTTCTTAGATGGACTTGCATCAAAAACCATGACAAACACTATGTTTGACCAACCAGCTTGTGATTATTTGAAGAAACTTGATACAACAAATTGGGAATATACCAATGGTTCAACTTCATTCAACACTAATTTTGAGAAGCACTTAAATGGATATAGTGAAGCTCTAATTGAGAATAATGAAAGGTTGACAAAATTATCCAATCTTGTTAGCACTTGGTCTATTGCCCCACCTGACCCTGAAGTTAGTAGCCACTTTGATCCACAAACAAACAATAATATGTCAAATAATTTGAATAATTCTTCATCCAATATGGATAATCACTTTGAATCTGACCCTAATTGTCATTTCAAACAATTACCTTTTGGAGATTCAACATCATGTACTATTGGAGGAGTAGGTAATAAAATGTTCCCTAATTTTCATGATCAAGACATGAATAAGGTTAAGCAAGAATTTAATCATCATGCAAGTGAAGTGATGCAACAAGGACATGTATTTGGAAAATCATTTAATCCAAATGGTTATCTTGATGGATTCAATAATAGACTTAATTCAATGGGAGATAGCAATAATGGAAAATTTTATCAAGGGTTGCCAAATATTTCACCATGCACAAAAACTTTCTCAGATGTTATATCTTTTAATAGTAGGTTTGGAAGGCCAATTCTTGGAATCCATGCACAAAGGCCTAGCATGAAATACTCAAACTTATCTGAGTTAAAGAAGCAAAGCCTTCAGACACCATCACATATGAGAAATAGTAATGGAAGAGGAGAAGGAACAACACGTGAAGTAAAAAAGAAAAGATCTGAAGAATCATCAGAAGCAAGTTTGAAGAAACCTAAACAAGATCCATCAACAACAAATTCATCTTCAAAGGTGCAAGCACCTAAAGTCAAGCTAGCAGACAAGATCACAGCCCTTCAACAAATTGTGTCTCCATTTGGAAAGACAGATACAGCATCTGTGCTGTTTGAAGCAATAGGGTACATAAAGTATCTTGAAGAACAAGTCCAGTTATTAAGCAACCCATACTTGAAGGCAAATTCACACAAGGACCCAAGGGGAAGCTATTTTGATAGAAAAGATAAGGAAGATGCAAAGATGGACCTTCGAAGCAAAGGTCTATGTTTAGTTCCAACTTCATGTACACCTTTAGTTTATAGAGAGAACACTGGACCAGATTACTGGACACCAGCATATAGAGGATGTTTGTATAGGTAA 1608 0.3595 MSEECGGNTIATSTTPLNWWYLQASNSLSSNWNDVNKHAWNNQINNPNSSSSCEDQDISVSSTSFTNASNHSSLTVESSRRVFVEPHAPPSSNDFMAEHASDNQLWSHVLSGVGSNGELHNNQEIGENFLDGLASKTMTNTMFDQPACDYLKKLDTTNWEYTNGSTSFNTNFEKHLNGYSEALIENNERLTKLSNLVSTWSIAPPDPEVSSHFDPQTNNNMSNNLNNSSSNMDNHFESDPNCHFKQLPFGDSTSCTIGGVGNKMFPNFHDQDMNKVKQEFNHHASEVMQQGHVFGKSFNPNGYLDGFNNRLNSMGDSNNGKFYQGLPNISPCTKTFSDVISFNSRFGRPILGIHAQRPSMKYSNLSELKKQSLQTPSHMRNSNGRGEGTTREVKKKRSEESSEASLKKPKQDPSTTNSSSKVQAPKVKLADKITALQQIVSPFGKTDTASVLFEAIGYIKYLEEQVQLLSNPYLKANSHKDPRGSYFDRKDKEDAKMDLRSKGLCLVPTSCTPLVYRENTGPDYWTPAYRGCLYR* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1053 535 MobiDBLite consensus disorder prediction 408 424 - -
Tpr1g1053 535 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 33 521 - -
Tpr1g1053 535 MobiDBLite consensus disorder prediction 368 384 - -
Tpr1g1053 535 CDD bHLH_AtbHLH_like 428 470 IPR045239 -
Tpr1g1053 535 PANTHER TRANSCRIPTION FACTOR BHLH111 33 521 - -
Tpr1g1053 535 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 413 462 IPR011598 GO:0046983
Tpr1g1053 535 MobiDBLite consensus disorder prediction 368 424 - -
Tpr1g1053 535 MobiDBLite consensus disorder prediction 385 407 - -
Tpr1g1053 535 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 428 477 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1053 Tpr-Chr1 9301139 9305220 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1053 45 535 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G31050 30.512 5.98e-38 142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1053 1 9301139 9305220 Tpr1g1053 1 9301139 9305220 ECH