Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0935 ATGCTTGTAGTGCCACCCAAACCCATCAACACAATCACAATCACCATCATGTTAGCCTTCACTTTCTTCCTCCTCTTCTTCTCCGGTTTCTTCAAATTCCCTTCCGTTTCACCCTCTCTCCCACCCTTCCACCAATCATCATCCTTCACCCTCCCTTCTACAAATACCTCCTCTCAACCCTTCACCGATCTGCTTTCTTCCTTCAGAAAATGGGATTTGCAAGTGGGTTGTGCTAAATTCAGAGAAAAAACAAATGGGGTTTCTTTAAATCACTCAAAGGTTGTTTCTTTGCAACAATTTGGTGCTGATTCTGAATGTAAGGGTTTTAAGCTTAATCATGTTAGTGTTTTGGTTAAAGGGTGGACTTGGATTCCTGATAATTTGGATAATTTGTATTCTTGTCCTTGTGGGTTGAGTTGTTTGTGGACCAAATCAAATGTTCTTGCTGATAAGCCTGATGCTTTCATGTTCGAAACTTCTACGCCTCCGATTCAGAGACGTGTGGGAGAACCACTTCGCGCGTATATGGATCTCGAAGCTGGCCGAAGGAGATCTGGTCGAGAGGATATATACATTAGTTACCATGCTGAAGATGATGTACAGTCAACCTATGCCGGTTCTCTGTTTCACAACGGTCGAAACTATTATGTCTCCAATACTAAAAGCAGTGATATACTTGTTTATTGGTCTTCATCGCGGTGTCTCTCTCAAAGGAATGAACTTGCCAAGAAACTTCTTGGCTTGCTGCCACATCATTCTTTTGGCAAGTGCCTGAACAATGTCGGTGGTCTAGATATGGCTCTTTCGTTCTTTCCCGAGTGTGAAAAAGATGCAAATGCTAAACCAAAATGGTGGGATCATTTACATTGTGCCATGTCTCACTACAAGTTTGTTCTTGCAATAGAGAACACTTTCACCGAGAGTTACGTGACAGAGAAGTTATATTATGCGTTGGACTCGGGTGCAGTGCCTATCTATTTTGGTGCACCAAACGTCATGGATTTTGTTCCTCCACATTCAATAATAGATGGCAGAAAATTCAAATCAGTGGAAGAACTGGCTTCATACGTGAAGGCTGTAGCTAATGACCCAGTAGCCTATGCAGAATACCATGCATGGAGAAGGTGCGGTGTAATGGGTAATTATGCAAAAACACGAGCCGTTAGCCTCGACACATTGCCATGCCGGTTATGTGAGGCTGTTAGCAAAAAAGGTGGAAGAAATGCAAGAAGCTAG 1236 0.428 MLVVPPKPINTITITIMLAFTFFLLFFSGFFKFPSVSPSLPPFHQSSSFTLPSTNTSSQPFTDLLSSFRKWDLQVGCAKFREKTNGVSLNHSKVVSLQQFGADSECKGFKLNHVSVLVKGWTWIPDNLDNLYSCPCGLSCLWTKSNVLADKPDAFMFETSTPPIQRRVGEPLRAYMDLEAGRRRSGREDIYISYHAEDDVQSTYAGSLFHNGRNYYVSNTKSSDILVYWSSSRCLSQRNELAKKLLGLLPHHSFGKCLNNVGGLDMALSFFPECEKDANAKPKWWDHLHCAMSHYKFVLAIENTFTESYVTEKLYYALDSGAVPIYFGAPNVMDFVPPHSIIDGRKFKSVEELASYVKAVANDPVAYAEYHAWRRCGVMGNYAKTRAVSLDTLPCRLCEAVSKKGGRNARS* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0935 411 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 225 405 IPR001503 GO:0006486|GO:0008417|GO:0016020
Tpr1g0935 411 Gene3D - 171 381 IPR038577 -
Tpr1g0935 411 PIRSF FucT_plant 4 411 IPR017177 -
Tpr1g0935 411 PANTHER ALPHA-(1,4)-FUCOSYLTRANSFERASE 15 410 - -
Tpr1g0935 411 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 15 410 IPR001503 GO:0006486|GO:0008417|GO:0016020
Tpr1g0935 411 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 104 403 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0935 4 409 Xyloglucan Fucosyltransferase1 AT1G71990 65.764 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0935 K14412 - gmx:100791990 661.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0935 1 8043471 8046666 Tpr1g0935 1 8043471 8046666 ECH