Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0405 ATGACTAAAGAAGAAGACTTTAAGCTCCTTAAAATCCAGACTTGTGTTCTCAAAGTGAACATTCACTGTGATGGTTGTAAGCAGAAAGTGAAGAAACTCCTTCAGAGAATTGAAGGTGTTTACCAAGTTCAAATAGATGCAGAACAACAGAAGGTAACAGTTTCAGGTTGTGTGGATGCTGCAACTTTGATCAAGAAACTAGTAAGATCTGGCAAATATGCTGAGTTATGGTCTCAGAAAACTAATAATAATCAGAATCAAAAGCAGAAGAACAACAACATTGTCAAAGATGACAAGAACAAAGGACAAAAACAAGTTGTCAAAGCACTTGAGGCCTTCAAAAACCAGCAGAAATTTCCTGCTTTTAGTTCCGAAGAGGACGGTGAATACTATGGTGGATACGGTGACGACGACGAAGAGGATGATCAAGAGACACGGTATGTCATGGAGGCAGCCAATCAACTTCAAATGATGAGGCAGCGTGTAGCCGATGCAAACAATGCGAAGAAAGCTATTGGAGCTAAGATGAACAATGCTGGCAATGTGAATGGAAATAGTGGTAAGAAAGGAAACTCAAATCAGAACATGGGAGGAATGAAGGAAAGTGCTAATGGTATTGATCAGAAAACAATTGCAGCTATGAAGTTGAACAATGGTCATTTAGTTGGTAATGAAAGTCTCAATCTTGGAGAATCCAAAAGGGCTAGTGAGATTGGTGCTATGATGAATTTAGCTGGTTTTAATGGTAATAACAATGGTGTTGGTAATGCTACTACTATTCTAGGTGGAAATTCCAATGGTTTAGGAGGTTTTCCTGTTCAAACCAATAATACTAATATGATTCAAGGTTCTTCTGCAGCTGCTATTCCAAATGGCGGTTTTGTTACCGGTCAATATCCAGCATCTATGATGATGAACATGAATGGTTTCAATAACCATCCATCTTCATTGATGAACATGAACATGCAGCAGGCAAGGCATGTTATGCAGCAGCAACAGCCTCAGATGATGTATCACAGGTCACCTTATGTTCCTCCTAACACTGGCTATTACTACAATTACAATAACTACATTCCTCCAGTTGCAAATTACTCATCCTATGCAAATCCTAGTTACCCAACGGAGGATAACTCTGCAGCACACATGTTCAGTGATGACAATACTACTAGCAGCTGTTCAATAATGTAA 1188 0.3914 MTKEEDFKLLKIQTCVLKVNIHCDGCKQKVKKLLQRIEGVYQVQIDAEQQKVTVSGCVDAATLIKKLVRSGKYAELWSQKTNNNQNQKQKNNNIVKDDKNKGQKQVVKALEAFKNQQKFPAFSSEEDGEYYGGYGDDDEEDDQETRYVMEAANQLQMMRQRVADANNAKKAIGAKMNNAGNVNGNSGKKGNSNQNMGGMKESANGIDQKTIAAMKLNNGHLVGNESLNLGESKRASEIGAMMNLAGFNGNNNGVGNATTILGGNSNGLGGFPVQTNNTNMIQGSSAAAIPNGGFVTGQYPASMMMNMNGFNNHPSSLMNMNMQQARHVMQQQQPQMMYHRSPYVPPNTGYYYNYNNYIPPVANYSSYANPSYPTEDNSAAHMFSDDNTTSSCSIM* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0405 395 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 37 1 395 - -
Tpr1g0405 395 Coils Coil 148 168 - -
Tpr1g0405 395 MobiDBLite consensus disorder prediction 81 101 - -
Tpr1g0405 395 Pfam Heavy-metal-associated domain 17 69 IPR006121 GO:0046872
Tpr1g0405 395 SUPERFAMILY HMA, heavy metal-associated domain 12 78 IPR036163 GO:0046872
Tpr1g0405 395 CDD HMA 16 75 IPR006121 GO:0046872
Tpr1g0405 395 ProSiteProfiles Heavy-metal-associated domain profile. 20 76 IPR006121 GO:0046872
Tpr1g0405 395 Gene3D - 12 84 - -
Tpr1g0405 395 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 1 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0405 Tpr-Chr1 3474524 3477328 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0405 1 3474524 3477328 Tpr1g0405 1 3474524 3477328 ECH