Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0395 ATGGGAGCTGAGAAGAAATGGCTTTTCACGTTATTTACTACAGCGGTTTTATCCTTAATGATTTTGTTAATGTCTTCTTTTTCTACCTTCAGTTCTCAAAAGCCTTTTCCTTCTCTTGTTCAACATGGTTCTCATTATCCTCCTGCTTTTGCATACTTTATCTCTGGTGGACATGGTGATAAAGACCGGATCTTTCGTTTGATGTTGGCAGTTTATCATCCGAGGAATCGTTACTTGCTTCATCTTGGTATGGATGCTAGGAATGAAGAGAGACAGGGTTTGGCTGATGCTGTTAATTCTGTTCCCGCGATTCGGGCTTTTGGGAATGTTGATGTGGTTGGTAAAGCTGATTGGATCACTTATTTGGGTTCTTCAAATGTTGCTATTACATTGCGTGCTGCTGCTATTATGCTTAAATTGGATAGTGGATGGAATTGGTTTATCACTTTGAGTGCACGTGATTATCCTCTTATTACACAGGATGATCTATCCCATGTTTTCTCTTCCATAAATAGAGACCTCAATTTCATTGATCACACCAGTGACCTTGGATGGAAAGAGACTGACAGATTTCAGCCTATTGTAGTCGACCCAGGAACATATTTAGCAAGGAGAAGTCAAATTTTTCAAGCCACAGAGAAGAGGAAAACACCCGATGCATTCAAACTCTTCACTGGTTCACCATGGGTCACCTTGAGCCGACCTTTTCTGGAGTTCTGCATTTTTGGGTGGGATAATTTACCACGAACGCTACTGATGTATTTTACAAATGTTAAGTTATCTCAAGAAGGCTACTTTCACTCAGTCATTTGCAACGCGCCAGAATTCAAGAACACAACAGTAAATGGCGACTTACGATACATGATATGGGACAATCCTCCAAAGATGGAACCTCTCTTCCTTAACACTTCAGTTTATGATATGATGGCAGAAAGTGGAGCAGCTTTTGCAAGACAGTTCGAAGCCAATAACCTCGTGCTGGATATGATAGACGGAAAAATTCTCAAACGCAGTGGCAATCGAGCCGCACCAGGAGCATGGTGCACCGGACGGAGGAGTTGGTGGGTGGATCCTTGCTCACAGTGGGGTGATGTCAATATTCTGAAGCCAGGTCCTCAGGCTAAGAAGCTTGAGGCGTCTATTTCTAGTCTTCTTGATGACTGGGCGGCACAGACAAATCAGTGCCAGTGA 1191 0.4282 MGAEKKWLFTLFTTAVLSLMILLMSSFSTFSSQKPFPSLVQHGSHYPPAFAYFISGGHGDKDRIFRLMLAVYHPRNRYLLHLGMDARNEERQGLADAVNSVPAIRAFGNVDVVGKADWITYLGSSNVAITLRAAAIMLKLDSGWNWFITLSARDYPLITQDDLSHVFSSINRDLNFIDHTSDLGWKETDRFQPIVVDPGTYLARRSQIFQATEKRKTPDAFKLFTGSPWVTLSRPFLEFCIFGWDNLPRTLLMYFTNVKLSQEGYFHSVICNAPEFKNTTVNGDLRYMIWDNPPKMEPLFLNTSVYDMMAESGAAFARQFEANNLVLDMIDGKILKRSGNRAAPGAWCTGRRSWWVDPCSQWGDVNILKPGPQAKKLEASISSLLDDWAAQTNQCQ* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0395 396 PANTHER GLYCOSYLTRANSFERASE 2 396 IPR044610 GO:0015020
Tpr1g0395 396 Pfam Core-2/I-Branching enzyme 50 297 IPR003406 GO:0016020|GO:0016757
Tpr1g0395 396 PANTHER OS01G0121800 PROTEIN 2 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0395 Tpr-Chr1 3391909 3396204 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0395 1 396 Glycosyltransferase AT1G71070 68.687 0.0 574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0395 1 3391909 3396204 Tpr1g0395 1 3391909 3396204 ECH