Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0392 ATGAGGTCTAACATTGAAGATATTCAAACTGCTCTACCACCTTTATTGAAGTTAATCTGCCTCACACTAATAGGACTACTTCTTGCAAATCCAAAAATGCAATTAATTCCCAAAGCCACATTTAAACTCCTAAGTAAACTTGTATTTGCATTATTTTTACCTTGCCTTATATTTAGTGAACTTGGTTCAAGCATAACTCTTGAGAATTTTAAGGAATGGTGGTTCATACCAATTAATGTACTTCTTAGTACATTTTTTGGATGCTTGCTTGGATTCATAGTTGTAACTATATGTCATCCACCTCAAAGGTTTAATAGATTCACAATCATAATGACGGGATTCGGAAACACCGGTAATCTTCTCATTGCTGTAGTCGGATCTGTTTGTCATACTCAAAATAGCCCTTTTGGAAAACAATGCAATTCAAGAGGTGTTGCTTATGTTTCATTATCTCAATGGATTTCTGTGATTCTTGTTTACACTTTTGTTCATCATATGATGGAACCTCCTTTTGAGTATTATGAGGTTGTTGAAAATGAAGGTGAAATTAGTGAAGAACAAGAAGAAACAATACTTAATGATATTAGTAGACCATTACTTGTAGAAGCCGAATGGCCCGGAATTGAAGATAAAGAAACTCAACATTCTAAGACACCGTTTATTGCTAGAATCTTTAAAAGCATTTCCGGTATTTCCTCATCCACTATTCCCGATCCTAGTTTTGCATCAGGATCGGGAATAATGGACGATGAAGAAAGTGATGAAAATAATCTTATGTCTATTAGGTGTTTAGCTGAGCCTAGAGTTGTTAGAAGGATAAGAATTGTTGCTAAACAAACACCAATTCATCATATACTTCAACCACCAACAATTGCATCTTTGTTAGCTATTATAATTGGAACAGTGCCTCAATTAAAAACATTTTTCTTTGGAGACAATGCACCAATGTCTTTTATGACAGATAGTTTAGAAATTTTAGCTGGTGCAATGGTTCCTTGTGTGATGCTTATATTAGGGGGTATGTTAGCAGAAGGACCAAATGAATCAACACTTGGAATTAGAACTACTATTGGGATAATTGTGGCAAGACTTGTGGTGCTTCCTATTATAGGAATTGGAATTGTTGTATTGGCTGATAAGATGAATTTTCTGGTTGAGAATGATGCTATGTTTAGATTTGTACTTTTGTTGCAGTATACAACACCAAGTGCTATTTTGTTAGGAGCAATTGCTAGCTTGAGAGGTTATGCAGTTAGTGAAGCTTCAGCAGTTCTATTTTGGCAACATGTGTTTGCTCTTTCCTCTCTTTCTATGTATATTATAATTTACTTTAGAGTAATTGATTACCTTTAG 1353 0.3452 MRSNIEDIQTALPPLLKLICLTLIGLLLANPKMQLIPKATFKLLSKLVFALFLPCLIFSELGSSITLENFKEWWFIPINVLLSTFFGCLLGFIVVTICHPPQRFNRFTIIMTGFGNTGNLLIAVVGSVCHTQNSPFGKQCNSRGVAYVSLSQWISVILVYTFVHHMMEPPFEYYEVVENEGEISEEQEETILNDISRPLLVEAEWPGIEDKETQHSKTPFIARIFKSISGISSSTIPDPSFASGSGIMDDEESDENNLMSIRCLAEPRVVRRIRIVAKQTPIHHILQPPTIASLLAIIIGTVPQLKTFFFGDNAPMSFMTDSLEILAGAMVPCVMLILGGMLAEGPNESTLGIRTTIGIIVARLVVLPIIGIGIVVLADKMNFLVENDAMFRFVLLLQYTTPSAILLGAIASLRGYAVSEASAVLFWQHVFALSSLSMYIIIYFRVIDYL* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0392 450 Pfam Membrane transport protein 12 440 IPR004776 GO:0016021|GO:0055085
Tpr1g0392 450 PANTHER AUXIN EFFLUX CARRIER FAMILY PROTEIN-RELATED 3 447 - -
Tpr1g0392 450 PANTHER PROTEIN PIN-LIKES 2 3 447 IPR039305 GO:0080162
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0392 Tpr-Chr1 3363031 3364669 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0392 1 3363031 3364669 Tpr1g0392 1 3363031 3364669 ECH