Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0378 ATGAAGAATTCAGAAGAAAAAGAAGGAGAAGAAGAAGAAGAAGAAGCATTGTCAAGAGCTGCAAAATCCACAGATGAACTTTACCTTCTTCGAGACACTTATTACCCTCAAAACCCTCACGATAGAATCTCATCATTGCAACAACTTTCCGATCTCATTCTCAATCTCCTTGATTCCGTTCCTCTAGAAGAAAGAAAATCACCTGCGCAACGGGCAATATATGAATATCTTAGAGGGAAGGTATTAGATGTATTTCCTGAATATAAGAAAGAAGCGGAGGATCATCTATCAAAAGCTGTTAAGTTGAATCCATCTCTTGCTGATGCTTGGCTATGTTTAGGAAACTGTATTTGGAAAAAAGGAGATTTATCTGCAGCAAAAAACTGCCTCAATCTTGCGTTAAACAAGGGTCCTAACAAAAAGATTCTTTGTCAATTATCGATGCTTAAAAGAAGCATGTCTCAAGGTGCGGATAATCAAGCAGAACTTGTTGATGAAAGCATTCAACATGCCAAGGAAGCAATTGCTTTGGATGTCAAGGATGGGAACTCTTGGTATAATCTTGGAAATGCATATCTTACAAGTTTTTTTGTCACTGGAGGTTGGGATCATACCAGACTTTCGCATTCTTTAAAAGCATATCAAAATGCTGAGAAAGATGAAGGTATCAAGTCCAATCCAGACTTTTACTTTAACAGTGCCACTGCTAACAAATATCTAGAGAACTACGAGAGGGCCCTTAGTGGATTTGAGGCTGCTGCTTTGAAGGATCCAGGTCTCAATGCTGCCGAGGAGGTTCAGAAAATTGTCAATTTACTTGACAAGGTGGACAATCTTTTGAGGGTGCATGTAAGAGCTAAGCGAATCGCCTCTTTGGCAGCATCATTGGCTGTTGTAAATTTGAAATCGTCATACAGAACAGTTACCATAGACCTTCTTTCAGAGGGTCTTAATAGAGCTCTAGCAGTACAGGGGAAGGTGATATTCTTTATTAGGAGTGACGGTGTTGCTCCTCTATACTATTTGTTGTGTGATTCAAACCAAACTTGCTTTGTTCTCTCAGTTTATGGTGTGCGTCAGGATGTGATTAAAGGAGGAGATCAGCTCACATTGCTTGATCCTTGTTTTCGTGAAGTTGATGTTTCCTGGAAGGAGAAGCATTACCAGTTCAAATCTATACGCCTGGATTTCTATGAGCAAGTGCTTGTTAATGGAAAAGCTCTGACTCCGCAGCAAGCTATTCATACGTCGATATATGCACAGCATAAACCATGA 1275 0.3984 MKNSEEKEGEEEEEEALSRAAKSTDELYLLRDTYYPQNPHDRISSLQQLSDLILNLLDSVPLEERKSPAQRAIYEYLRGKVLDVFPEYKKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSAAKNCLNLALNKGPNKKILCQLSMLKRSMSQGADNQAELVDESIQHAKEAIALDVKDGNSWYNLGNAYLTSFFVTGGWDHTRLSHSLKAYQNAEKDEGIKSNPDFYFNSATANKYLENYERALSGFEAAALKDPGLNAAEEVQKIVNLLDKVDNLLRVHVRAKRIASLAASLAVVNLKSSYRTVTIDLLSEGLNRALAVQGKVIFFIRSDGVAPLYYLLCDSNQTCFVLSVYGVRQDVIKGGDQLTLLDPCFREVDVSWKEKHYQFKSIRLDFYEQVLVNGKALTPQQAIHTSIYAQHKP* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0378 424 SUPERFAMILY TPR-like 90 251 IPR011990 GO:0005515
Tpr1g0378 424 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 17 348 - -
Tpr1g0378 424 MobiDBLite consensus disorder prediction 1 21 - -
Tpr1g0378 424 Gene3D Tetratricopeptide repeat domain 8 283 IPR011990 GO:0005515
Tpr1g0378 424 Pfam Tetratricopeptide repeat protein 5 OB fold domain 305 415 IPR032076 -
Tpr1g0378 424 SMART tpr_5 72 106 IPR019734 GO:0005515
Tpr1g0378 424 SMART tpr_5 107 140 IPR019734 GO:0005515
Tpr1g0378 424 SMART tpr_5 227 260 IPR019734 GO:0005515
Tpr1g0378 424 Gene3D - 284 423 IPR038645 -
Tpr1g0378 424 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 17 348 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0378 1 3278200 3286381 Tpr1g0378 1 3278200 3286381 ECH