Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0367 ATGGGTGAAGAGAGAAACATGATGGAAGAGAGTCTATTAGCAAAAGTACAAATTGATTCAAAAACAGAGAGTGGTGATGAAGAAGAACAGAGGAAGAAGAGAATAATTAGTTGGGATATTTACATGGAAGAAATGACGAGGATTTGTTACATATCAGGGCCTATGGTAGCTGTAGTATTATCAACTAAACTGTTGCAAGTTGTTTCAACTATGATTGTTGGTCACTTAGGTGAACTCTATCTCTCTAGCGCCGCCTTATCTATTTCCTTCACCGGTGTCACTGGTTTCAGCTTCTTGCTGGGAATGGCTAGTGGACTAGAAACAACATGTGGACAAGCTTATGGAGCTAAACAATATCAAAGAATAGGAATGCAAACATACACAGCTATATTTTCTCTCATATTAGTTTGTATTCCACTCTCTTTCATTTTGATCAACATTGAAAACATACTAGTTTTTACAGGACAAGACCCTTTAATTGCACATGAAGCAGGAAGATTCACAATTTGGCTTCTTCCAGCAGTTTTTGCTTATGCAATATTGCAACCACTAGTTAGATATTTTCAAATACAAAGCTTGCTTTTTCCAATGCTTTTAAGCTCTTGTGTCACTCTTGGTATCCATGTACCTCTTTGTTGGGCTTTGGTATTCAAGACAGGGTTAGGTAATGTTGGTGGTGCAATATCAATGAGCATTTCCATTTGGTTGAATGTAATTTTTCTTGGATTATATATGAGATTCTCTTCTGCGTGTGCAAAAACTAGAGCGCCGATTTCTATGGAACTATTTCAAGGAATTTGGGAGTTTTTTCGCTTTGCCATACCTTCCGCAGTAATGATTTGTCTAAATACCATTGCAACTCTCTATACAATACCATTTGGAATTGGTGCTGCAGCAAGCACAAGAGTTTCAAATGAATTAGGAGCTGGGAATCCATTTGAAGCACGCATCGCTGTATTGGCTGCTATGTCACTTTCACTCATTGAAACAAGTATTGTGAGTTCAACCCTAATTGCATGCAGGCATGTTTATGGTTACATTTTCAGTAATGATAAAGAAGTTGTTGATTATGTCACTGTCATGGCTCCTCTAGTTTCTTTGTCTGTTATATTCGACAGCGTACAAGGCGTTCTCTCAGGGGTTGCTAGAGGTTGTGGATGGCAACACCTAGGAGTATATGTCAATCTAGGGGCCTTCTATCTCTGTGGGATTCCTGCTGCTGCTGCATTGGCATTTTGGGTTCAAGTGGGAGGAAAAGGGCTTTGGATTGGCATACAAGTTGGTGCTTTTGTTCAATGTGTTCTTCTTTCCATCATAACATGTTGTATAAATTGGGAGCAACTGGCAATGAAGGCTAGACAAAGGTTGTTTGATGTTCAATTTTCAGCAGAGGATAGACTTGTATAA 1407 0.3888 MGEERNMMEESLLAKVQIDSKTESGDEEEQRKKRIISWDIYMEEMTRICYISGPMVAVVLSTKLLQVVSTMIVGHLGELYLSSAALSISFTGVTGFSFLLGMASGLETTCGQAYGAKQYQRIGMQTYTAIFSLILVCIPLSFILINIENILVFTGQDPLIAHEAGRFTIWLLPAVFAYAILQPLVRYFQIQSLLFPMLLSSCVTLGIHVPLCWALVFKTGLGNVGGAISMSISIWLNVIFLGLYMRFSSACAKTRAPISMELFQGIWEFFRFAIPSAVMICLNTIATLYTIPFGIGAAASTRVSNELGAGNPFEARIAVLAAMSLSLIETSIVSSTLIACRHVYGYIFSNDKEVVDYVTVMAPLVSLSVIFDSVQGVLSGVARGCGWQHLGVYVNLGAFYLCGIPAAAALAFWVQVGGKGLWIGIQVGAFVQCVLLSIITCCINWEQLAMKARQRLFDVQFSAEDRLV* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0367 468 Pfam MatE 54 213 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tpr1g0367 468 Pfam MatE 276 406 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tpr1g0367 468 PANTHER MULTIDRUG RESISTANCE PROTEIN 281 455 - -
Tpr1g0367 468 PANTHER MULTIDRUG RESISTANCE PROTEIN 21 283 - -
Tpr1g0367 468 PANTHER PROTEIN DETOXIFICATION 281 455 - -
Tpr1g0367 468 PANTHER PROTEIN DETOXIFICATION 21 283 - -
Tpr1g0367 468 CDD MATE_eukaryotic 44 449 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0367 Tpr-Chr1 3206692 3211374 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0367 1 3206692 3211374 Tpr1g0367 1 3206692 3211374 ECH