Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0365 ATGGAAAAGGGTTTGTTAGAGAAAGACATAGAGGGTGGTTCAGATAGCATAACATGGGGTGTATTTGTTCAAGAAGTGAAAGATGTTGGTTTTCTAGCATTGCCTATGATTAGTGTTACTTTGTCACAATATTTTCTACAAATTATTTCAATGATGATGGTTGGTCATTTGGGTAAGCTTGCTCTCTCTAGCACTGCAATTGCTATCTCTCTTTGTGCTGTCTCTGGCTTCAGTCCTCTTTTTGGAATGTCATGTGCACTTGAAAGTTTATGTGGGCAAGCTTATGGTGCAAAGCAATATAAAAAATTTGGTGTGCAAATTTACACTGCTATAATTTCTCTTATTATAGCTGGAGTCCCTCTCTCTTTATTATGGCTGAACTTGGGGAAGATATTGAGTTTACTTGGCCAAGACCCTTTGATTTCACAAGAAGCTGGAAAATTTGCAATGTGCATGATTCCTGCGCTATTTGCTTATGCAACACTTCAGGCACTGGTCAGATACTTTCTAATGCAAAGTTTGATACTTCCTCTTGTAATAAGTTCCTCCGTTACACTTTGCTTCCATGTAGCATTTTCTTGGTTGCTAGTTTTTAAATCCGGATTAGGTTGCTTAGGAGCTGCATTTTCTATTGGTACTTCATATTGGTTGAATGTAGTTATACTTGGATTATATATGAAATTCTCTGCTGATTGTGAGAAGACTCGGGTTCCGATTTCAATGGAATCATTCCTCGGAATTGGAGAGTTTTTTCGCTATGCTATTCCTTCGGCAGGAATGATTTGCCTTGAGTGGTGGTCATTTGAGCTCTTAGTCTTTCTTTCTGGTCTTCTACCAAATCCACAGCTTGAAACTTCAGTCTTATCGATATGTTTATCGATCATCTCGACAATCTATACAATACCAGAAGCAACTGGCTCAGCAGCAAGTGCTAGAGTTTCAAATGCATTAGGAGCTGGATATCCACAAGCAGCGCGATTGTCTGTTTATGCTGCTATGACTCTTGCAGTTTCTGAGGCTATTTTGGTGAGTTCCACCATTTTCTCCTCTCGACGGGTTTTAGGTTATCTATTTAGCAATGAGCAGGATGTGGTGGATTATGTCACAGATATGGTTCCTCTGATAAGTGTATCTGTTATTATGGATACATTACATGGTACCCTTTCAGGTATTGCTAGAGGATGTGGTTGGCAGAAGTTGGGAGCATATGTGAACCTTGGAGCCTATTATGTTTTTGGAATTCCAATTGCTGTTATATTGGGTTTCTGGTTTGAGTTGAGAGGAAAAGGCCTGTGGATTGGGATAGCTGTTGGTGCCTTTTGTCAAGCACTTTTGCTTTCCCTTATTACAAGTTTCACAAACTGGGAAAAACAGGCAATTAAGGCACGAGAAAGAATATTTCAAGGAAGTTTTGCAGCAGAAGATAGATTAGTTTGA 1437 0.3932 MEKGLLEKDIEGGSDSITWGVFVQEVKDVGFLALPMISVTLSQYFLQIISMMMVGHLGKLALSSTAIAISLCAVSGFSPLFGMSCALESLCGQAYGAKQYKKFGVQIYTAIISLIIAGVPLSLLWLNLGKILSLLGQDPLISQEAGKFAMCMIPALFAYATLQALVRYFLMQSLILPLVISSSVTLCFHVAFSWLLVFKSGLGCLGAAFSIGTSYWLNVVILGLYMKFSADCEKTRVPISMESFLGIGEFFRYAIPSAGMICLEWWSFELLVFLSGLLPNPQLETSVLSICLSIISTIYTIPEATGSAASARVSNALGAGYPQAARLSVYAAMTLAVSEAILVSSTIFSSRRVLGYLFSNEQDVVDYVTDMVPLISVSVIMDTLHGTLSGIARGCGWQKLGAYVNLGAYYVFGIPIAVILGFWFELRGKGLWIGIAVGAFCQALLLSLITSFTNWEKQAIKARERIFQGSFAAEDRLV* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0365 478 Pfam MatE 256 419 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tpr1g0365 478 Pfam MatE 35 195 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tpr1g0365 478 CDD MATE_eukaryotic 25 461 IPR045069 GO:0042910|GO:1990961
Tpr1g0365 478 PANTHER MULTIDRUG RESISTANCE PROTEIN 8 464 - -
Tpr1g0365 478 TIGRFAM matE: MATE efflux family protein 35 432 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tpr1g0365 478 PANTHER PROTEIN DETOXIFICATION 8 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0365 Tpr-Chr1 3195629 3199382 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0365 1 3195629 3199382 Tpr1g0365 1 3195629 3199382 ECH