Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0355 ATGGCTTGTGTAAAACTCAATTCTCTCTCTTCCCAATGGATCGCAAACAACCCTTTCTCTTCTCGCCGTGGATCTTCTTCTTCCTCTATCTCCACCGCCCCTCGCGGTGTCTCTCTTCGGATCCGCGCCTCTTACTCCGATGAACTTGTTCAAACCGCTAAATCTGTTGCATCTCGCGGTCGTGGAATTCTTGCAATTGATGAATCAAATGCAACTTGTGGGAAGCGTTTGGCATCGATTGGATTGGACAATACTGAGGTTAATCGCCAGGCTTACAGGCAACTTCTGTTGACAACACCCGGTCTTGGTGAATATATTTCTGGTGCAATTCTTTTTGAGGAAACACTTTATCAGTCAACAAATGATGGGAAGAAGTTTGTGGATGTTCTCCGCGAGGAGAAGATTGTACCTGGCATCAAAGTTGATAAGGGTTTGGTTCCTCTACCAGGGTCAAACAATGAATCTTGGTGCCAAGGGTTGGATGGATTGGCTTCCAGATCTGCTGAATACTACAAGCAAGGTGCCCGATTTGCCAAGTGGCGTACAGTTGTCAGCATTCCATCTGGTCCTTCTGCCTTAGCTGTTAAGGAAGCAGCTTGGGGACTTGCACGATATGCTGCTATCTCTCAGGACAACGGTCTTGTTCCAATAGTTGAGCCTGAAATTCTTCTTGATGGGGACCACCCAATTGAGAGGACACTGGAAGTTGCCGAAAAGGTATGGTCAGAAGTCTTCTTCTATTTGGCACAAAACAATGTCCTTTTTGAGGGAATTTTGCTCAAGCCTAGCATGGTTACACCTGGTGCTGAGCACAAGCAAAAGGCTTCCCCAGAAACCATTGCCAATTTTACATTAAACCTGCTTAAAAGAAGAGTTCCTCCTGCGGTGCCCGGAATCATGTTTTTGTCCGGTGGACAATCAGAAGTTGAAGCAACACTAAATCTTAATGCTATGAACCAAAGTCCCAACCCATGGCACGTGTCATTCTCATATGCACGAGCCCTTCAGAACACTGTTCTTAAGACATGGCAAGGTCGCCCTGAGAATGTAGAAGCAGCTCAAAAGTCTCTTTTGGTCCGCGCCAAAGCCAATTCCTTGGCTCAGCTCGGAAGATACTCCGCTGAAGGCGAAAATGAAGAAGCCAAGAAAGGAATGTTCGTCAAGGGCTACACCTACTAG 1179 0.4656 MACVKLNSLSSQWIANNPFSSRRGSSSSSISTAPRGVSLRIRASYSDELVQTAKSVASRGRGILAIDESNATCGKRLASIGLDNTEVNRQAYRQLLLTTPGLGEYISGAILFEETLYQSTNDGKKFVDVLREEKIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSAEYYKQGARFAKWRTVVSIPSGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAQNNVLFEGILLKPSMVTPGAEHKQKASPETIANFTLNLLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTVLKTWQGRPENVEAAQKSLLVRAKANSLAQLGRYSAEGENEEAKKGMFVKGYTY* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0355 392 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 25 392 - -
Tpr1g0355 392 Gene3D Aldolase class I 30 391 IPR013785 -
Tpr1g0355 392 SUPERFAMILY Aldolase 42 392 - -
Tpr1g0355 392 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 253 263 IPR029768 -
Tpr1g0355 392 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 25 392 IPR000741 GO:0004332|GO:0006096
Tpr1g0355 392 Pfam Fructose-bisphosphate aldolase class-I 48 392 IPR000741 GO:0004332|GO:0006096
Tpr1g0355 392 CDD FBP_aldolase_I_a 46 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0355 Tpr-Chr1 3123895 3127127 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0355 43 392 Miscellaneous Gene Families AT3G52930 54.802 1.06e-132 383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0355 1 3123895 3127127 Tpr1g0355 1 3123895 3127127 ECH