Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0354 ATGTATCATCATCAAAATGGTTCTTTGGAGCGCAGAGCTCAAGCATCAAATGGAGACATTGCTACTAACAACGTTGTTACTGTTATTTCCAATTCAAATCCAATAACAACAAGACTTCTTGGAAGCCCTAGAAGTGATCACATGCCTGATAACTATGAAGATCTTCCTTTGGATTTCAACCCTCTTGTCTTCACTTCTCTTGAGAGACATCTTCCTCCTCATGTTATTAATCTCTCTAAAGATGTTAAAGCTCACTACATGTCTAACATTCTTCTCCGTTATTTGCCTCACTCTGAACGCACTCGGATGCAAAAGCAAAAGGAATACAGGCAAAAGATCATATTAAATTACCCTCCGCTACATAAGGAGATATATACCATGCATAGTGAAAACTTTTTTACACCCTCATTTCTCAGAGCTATGAAAGCAAATACAGCAGCGAGTTTTAGAAGTATTATGGCTGAACCCTCCAGAGGAATTTATACGTTTGAAATGCTTCAACCACATTTTTGTGAAATGTTGGTATCTGAGGTAGATCATTTTGAAAGATGGGTCCATGAGACCAAATTCAGAATCATGCGACCTAATACAATGAATCAATATGGTGCTGTTCTTGATGATTTTGGCCTGGAAAACATGCTTGATAAATTGATGAATGATTTCATACGCCCTTTAGCTGGAGTTTTCTTTTCTGAAATTGGTGGATCCACATTGGACTCTCATCATGGTTTTGTTGTTGAATATGGAACTAATAGGGATGTGGACCTTGGGTTCCATGTGGATGATGCGGAAGTCACGTTAAATATTTGCTTGGGAACACAATTTTCTGGTGGCGAACTGTTCTTCCGAGGTGTTCGATGTGATGAACATGTGAATACCGAGACCCAGACAGGGGAGATATTCGATTATTCCCATGTTCCAGGACATGCAGTCCTTCATTCTGGTCGCCACCGTCATGGTGCTAGACCTACAATATCCGGAAATCGTATCAATTTAATTCTCTGGTGTAGAAGTTCGGCGTTTAGAGAGATCAAGAAATATCAGAGAGAATTTCCTAACTGGTGTGGAGAATGCAGACGCAAGAAGAAGGAGAGAGAGCGTGTATCAATCGCTGCTACCAAAGAGGAATTACTAAAGAGGGAACTTAAATCAGCCTCGTGA 1161 0.4014 MYHHQNGSLERRAQASNGDIATNNVVTVISNSNPITTRLLGSPRSDHMPDNYEDLPLDFNPLVFTSLERHLPPHVINLSKDVKAHYMSNILLRYLPHSERTRMQKQKEYRQKIILNYPPLHKEIYTMHSENFFTPSFLRAMKANTAASFRSIMAEPSRGIYTFEMLQPHFCEMLVSEVDHFERWVHETKFRIMRPNTMNQYGAVLDDFGLENMLDKLMNDFIRPLAGVFFSEIGGSTLDSHHGFVVEYGTNRDVDLGFHVDDAEVTLNICLGTQFSGGELFFRGVRCDEHVNTETQTGEIFDYSHVPGHAVLHSGRHRHGARPTISGNRINLILWCRSSAFREIKKYQREFPNWCGECRRKKKERERVSIAATKEELLKRELKSAS* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0354 386 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 15 384 - -
Tpr1g0354 386 SMART p4hc 158 337 IPR006620 GO:0005506|GO:0016705|GO:0031418
Tpr1g0354 386 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 15 384 - -
Tpr1g0354 386 Gene3D q2cbj1_9rhob like domain 157 338 - -
Tpr1g0354 386 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 239 338 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0354 Tpr-Chr1 3115491 3122200 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0354 1 3115491 3122200 Tpr1g0354 1 3115491 3122200 ECH