Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0348 ATGGCCGTTGACAGAGAATCTCTCACCAATGCTGATTCTGGCCAATCTCGTCTTCACGAGCTTGGTTACAAACAAGAACTCAAACGCGACCTTTCGGTACTTTCAAATTTTGCGTTTTCATTTTCAATAATATCAGTATTAACTGGAGTAACTACACTTTACAACACTGGTTTAAACTATGGAGGTCCTGTTTCACTTGTATATGGATGGCTTATAGCTTCTTTTTTTACCATGCTTGTTGCTTTATCTATGGCTGAAATTTGTTCTTCTTATCCAACTTCTGGTGGTCTTTATTATTGGAGTGCTAAACTTGCTGGTCCCAATTGGGCACCTTTTGCTTCCTGGATTACTGGCTGGTTCAATATTGTTGGTCAGTGGGCAGTGACAACAAGTGTAGATTTTTCACTTGCACAGCTCATTCAGGTTATCATTCTTCTTAGTACTGGTGGAAAAAACGGCGGTGGTTATGAAGGATCCAAATATGTAACTATTGCTTTCCATGGTGGAATTTTGGTCCTACATGGTATATTGAACAGCCTTCCAATCTCATGGTTATCATTCTTAGGACAGTTGGCCGCTTTCTGGAATGTTTTAGGTGTTTTTGTGCTTATGATTATCATTCCATCTGTTGCACCGGAAAGAGCGAGTGCCAAGTTTGTTTTCACTAATTTCAATAGCGACAACGGGGAAGGAATCAATAGTAAGCCGTATATATTTCTCTTGGGACTTCTAATGAGTCAGTACACCCTAACAGGATATGATGCATCAGCTCATATGACAGAGGAAACCAAGGACGCTGATATTAATGGACCAAAAGGAATTATTAGTGCTGTTGGGATATCTGTTATTGCTGGATGGGGTTACATACTAGGAATTACCTTTGCCGTTACCGATATCCCTTACCTTTTGAATGAAAATAATGAAGCTGGTGGATACGCCATTGCAGAAGTATTTTATCTTGCATTTAAGAGAAGATATGGCCATGGATTTGGTGGCATTATTTGCTTAGGAATTGTTGCTGTTGCTATATTTTTCTGTGGTATGAGTTCAGTTACAGCCAATTCAAGAATGGCTTATGCTTTCTCAAGAGATGGGGCTATGCCATTGTCATCATTGTGGCATAAAGTTAACAGCCAGGAGGTCCCCATAAATGCTGTTTGGCTTTCCGTTATAATATCGTTTTGCATGGCACTAACGTCTCTTGGAAGCATAGTGGCATTTGAAGCCATGGTATCCATAGCAGTGATTGGTCTCTACATTGCTTATGCACTACCTATATTCTTCAGAGTGACATTGGCGCGAAAGCGTTTCGTACCAGGGCCTTTCAATTTGGGCATTTACGGAGTCCTTGTTGGTTGGATTGCAGTTCTTTGGGTGGCAATAATCTCTATACTATTCTCATTGCCTGTTTCCTATCCAATAACCATTGAGACACTAAACTACACACCTGTTGCTGTTGGATGTTTGCTCATTATTGTACTTTCTTATTGGATAATCAGTGGTAGGCGTTGGTTTAGAGGCCCTGTAACCAATATATAA 1539 0.4022 MAVDRESLTNADSGQSRLHELGYKQELKRDLSVLSNFAFSFSIISVLTGVTTLYNTGLNYGGPVSLVYGWLIASFFTMLVALSMAEICSSYPTSGGLYYWSAKLAGPNWAPFASWITGWFNIVGQWAVTTSVDFSLAQLIQVIILLSTGGKNGGGYEGSKYVTIAFHGGILVLHGILNSLPISWLSFLGQLAAFWNVLGVFVLMIIIPSVAPERASAKFVFTNFNSDNGEGINSKPYIFLLGLLMSQYTLTGYDASAHMTEETKDADINGPKGIISAVGISVIAGWGYILGITFAVTDIPYLLNENNEAGGYAIAEVFYLAFKRRYGHGFGGIICLGIVAVAIFFCGMSSVTANSRMAYAFSRDGAMPLSSLWHKVNSQEVPINAVWLSVIISFCMALTSLGSIVAFEAMVSIAVIGLYIAYALPIFFRVTLARKRFVPGPFNLGIYGVLVGWIAVLWVAIISILFSLPVSYPITIETLNYTPVAVGCLLIIVLSYWIISGRRWFRGPVTNI* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0348 512 PIRSF AA_transporter 13 510 - -
Tpr1g0348 512 PANTHER AMINO-ACID PERMEASE BAT1 HOMOLOG 8 512 - -
Tpr1g0348 512 Pfam Amino acid permease 31 488 IPR002293 GO:0016020|GO:0022857|GO:0055085
Tpr1g0348 512 ProSitePatterns Amino acid permeases signature. 61 92 IPR004840 GO:0006865|GO:0016021|GO:0055085
Tpr1g0348 512 PANTHER AMINO-ACID PERMEASE BAT1 8 512 - -
Tpr1g0348 512 Gene3D Amino acid/polyamine transporter I 25 504 - -
Tpr1g0348 512 TIGRFAM 2A0304: amino acid permease 18 508 IPR004756 GO:0006865|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0348 Tpr-Chr1 3045748 3050672 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0348 78 512 Organic Solute Cotransporters AT2G01170 78.391 0.0 662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0348 1 3045748 3050672 Tpr1g0348 1 3045748 3050672 ECH