Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0345 ATGCCAGAAATTCAGTTGGGTGTACACACTATCAGATCACATGGAGCTAGAGTCGCAAGGATACATATGCATGACTGGTTGATTCTTTTGCTTCTTGTGGTAATTGATGCTGTCTTGAATATAATAGAGCCATTTCACCGTTTTGTTGGAGATGGGATGTTAACGGACCTTAGATACCCACTGAAGGATAACACGATTCCCTTTTGGGCAGTTCCGATAATAGCAATATTGCTGCCACTTGCCGTCTTTCTTGTTTACTATATCATTCGAAAGGATGTTTATGACTTTCACCATGCCGTATTAGGCCTTCTATTTTCCGTACTCATTACTGCGGTGATAACTGATGCTATTAAAGATGGTGTTGGACGGCCACGGCCGGATTTCTTCTGGCGCTGTTTCCCTAATGGAACAGGGGTGTTTGATAAAGTAACAGGCGATGTCCAGTGTACTGGAGATAAAGGTGTTATAAAGGAAGGGCACAAAAGTTTCCCGAGTGGGCATACATCTTGGTCCTTCGCTGGTCTTGTTTATCTCTCTTGGTATCTATCTGGAAAAGTTAGGGTGTTTGATCGCAGTGGCCACGTTGCAAAGCTCTGTCTTGTTCTCTTACCCCTCCTCACGGCAGCTTTAATTGCTGTCTCTCGTGTTGATGATTATTGGCATCATTGGCAAGATGTGTTTGCTGGAGGTCTTATAGGGACGACAATTTCTTCCTTTTGTTACTTACAATTCTTTCCACCTCCATATGACAGTGATGGTTGGGGACCTCATGCATATTTCCAGATGTTAGCTGAATCTCGTAATGGTGCTCAGCCGCCCATTATCGATGACAGTCAACTTGCGCAATCCGCAGAGCTTCAGAATGTATCTTTGTATATCCCATCTCAACATGATGGAGATGCACGAGGCAATAGCTGGGATTCAAGCCCCATGTTAGATGGTGGGTTATCACAAAATGCAAGGATGCATTGA 972 0.4393 MPEIQLGVHTIRSHGARVARIHMHDWLILLLLVVIDAVLNIIEPFHRFVGDGMLTDLRYPLKDNTIPFWAVPIIAILLPLAVFLVYYIIRKDVYDFHHAVLGLLFSVLITAVITDAIKDGVGRPRPDFFWRCFPNGTGVFDKVTGDVQCTGDKGVIKEGHKSFPSGHTSWSFAGLVYLSWYLSGKVRVFDRSGHVAKLCLVLLPLLTAALIAVSRVDDYWHHWQDVFAGGLIGTTISSFCYLQFFPPPYDSDGWGPHAYFQMLAESRNGAQPPIIDDSQLAQSAELQNVSLYIPSQHDGDARGNSWDSSPMLDGGLSQNARMH* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0345 323 PANTHER LIPID PHOSPHATE PHOSPHATASE 2 1 299 - -
Tpr1g0345 323 PANTHER LIPID PHOSPHATE PHOSPHATASE 1 299 IPR043216 GO:0006644
Tpr1g0345 323 Pfam PAP2 superfamily 100 245 IPR000326 -
Tpr1g0345 323 CDD PAP2_containing_1_like 55 244 - -
Tpr1g0345 323 SMART acid_phosph_2 98 241 IPR000326 -
Tpr1g0345 323 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 21 249 IPR036938 -
Tpr1g0345 323 MobiDBLite consensus disorder prediction 303 323 - -
Tpr1g0345 323 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 19 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0345 Tpr-Chr1 3026922 3032920 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0345 1 289 Lipid Metabolism Gene Families AT1G15080 75.087 7.66e-158 441
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0345 1 3026922 3032920 Tpr1g0345 1 3026922 3032920 ECH