Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0344 ATGGCGTTAGGGGGTTTTGCTAAATTTTGGACATTCTTTCAGGGAGGGAGACAGATTGATCCTTCTGCACATACAATAAAGTCTCATGGAGCCACAGTTGCAAGAAATCATCTTCATGATTGGATTATATTGGTGCTTCTCATAATAATAGAGGTTATCCTCAATAAAATTCAGCCATTTCACCGTTTTGTGGGAAGGGACATGATGGAAGACCTTATGTATCCAATGAAAAAAAACACTGTGCCTATATGGACTGTTCCTCTTTATGCAGTTCTGTTGCCAATAACTGTGTTCCTCTTCGTCTATATGCGTAGGAGAGATGTTTATGATTTGCACCACAGTGTTCTAGGCCTCCTATATGCTATTCTGATAACTGGGGTGTTGACCGATTCAATTAAAGATGCTGTTGGCCGGCCACGACCAGACTTCTTTTGGCGTTGCTTTCCTGATGGAGTACAGGTGTATGATAAATTCGGAGGTGTGGTTTGCCATGGCAATGCTGATGAAATGAAAGAAGGACATAAGAGTTTTCCAAGTGGTCATACATCATGGTCCTTTGCAGGTCTTGGTTTTCTCTCCTTGTATCTATCCGGGAAGATTAAAGTTTTTGATCGTAAAGGGCACGTGGCGAAATTATGCATTGTGTTTTTACCTCTACTTTTTGCCTGCATGGTTGGAATCTCTAGAGTGGATGACTATTGGCACCATTGGACAGATGTGTTTGCTGGAGGTCTTCTAGGTCTAGTTGTTACTACATTTTGCTATTCACAGTTCTTCCCTCCTCCCTATAACGATGACGGATGGGGTCCATATGCATATTTTGTGGCTATGGAGGAATCAAGAAACAATGCAAGTCTGAATCGGGAATTACCTGCTGTACAAACCATGGATGAAAGTAGGCTTGTAAATCAAGTGCCAAGGAGAAATGGTGATGCATTAACCCCTTTCACTTATCTTAGCCCAACCTTGGAAGCCATGGAGATGGGACATAACCCACAAGTGAAATCATCATGA 1014 0.4201 MALGGFAKFWTFFQGGRQIDPSAHTIKSHGATVARNHLHDWIILVLLIIIEVILNKIQPFHRFVGRDMMEDLMYPMKKNTVPIWTVPLYAVLLPITVFLFVYMRRRDVYDLHHSVLGLLYAILITGVLTDSIKDAVGRPRPDFFWRCFPDGVQVYDKFGGVVCHGNADEMKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIKVFDRKGHVAKLCIVFLPLLFACMVGISRVDDYWHHWTDVFAGGLLGLVVTTFCYSQFFPPPYNDDGWGPYAYFVAMEESRNNASLNRELPAVQTMDESRLVNQVPRRNGDALTPFTYLSPTLEAMEMGHNPQVKSS* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0344 337 CDD PAP2_containing_1_like 72 258 - -
Tpr1g0344 337 PANTHER LIPID PHOSPHATE PHOSPHATASE 14 326 IPR043216 GO:0006644
Tpr1g0344 337 PANTHER LIPID PHOSPHATE PHOSPHATASE 1 14 326 - -
Tpr1g0344 337 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 37 262 IPR036938 -
Tpr1g0344 337 Pfam PAP2 superfamily 115 259 IPR000326 -
Tpr1g0344 337 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 32 266 - -
Tpr1g0344 337 SMART acid_phosph_2 115 255 IPR000326 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0344 Tpr-Chr1 3018214 3023016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0344 17 299 Lipid Metabolism Gene Families AT3G02600 67.944 1.54e-153 432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0344 1 3018214 3023016 Tpr1g0344 1 3018214 3023016 ECH