Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0342 ATGGGAATCATCCAATACGATCCAATCTATTCTCTCTGCAAAGTTTCTTCTTCAACCTTCCGTCGTTTCCCACGCGCCACCGTTCCCTTTCGTCTTAAAGCCTTCTCCACCGGCGTCCACGATAAGCCTTCCATTTGCACCGCCGATGAACTTCACTATGTTTCCGTCTCCAATTCCGATTGGAAACTCGCTCTCTGGCGCTACCACCCTTCTCCTAAGGCACCTCCAAGGAATCATCCTCTGTTGCTTTTGTCAGGAGTGGGGACAAATGCCGTAGGATATGACCTTTCCCCTAAGTCATCCTTTGCACGTCACATGTCTGGTCAGGGATTTGAGACTTGGATTCTTGAATTACGAGGAGCTGGGTTGAGTGTTCAGGGTTCAAATTCCAAAGATATTGAACAGTCTGCCAATGCAATGTCTGAGAAGATGGAAGATGTGTTAGAAAATGCAACCAATGAACCCATGTCTTCAAAAAAGGAATTGGATAACATAGCTGGTGCTGTGTCTGGACCTTACAATTCTGCCTCAGAAGGAGTAGAAACAGAGAATGTGGCTGTCATAGGAGACCTAACTAGGTTAGCTACTGCTTGGGATGAATCAAAGTTGGTCGCTAGGTTGTCTGAGACTTTTACGAGTTTGTCAGAAAGAGTCTCTGGCTTTCTTGGTGAAAGTCAAGCGAAGGTCATGTCTGCCAAATTACTTGATCAGTTTTCAAAACTTTTGGTGGATTCTCCATTATATGAACAATTCAACGAGGTAAGGGGAAAGCTTGCAACTTTGTTGGAAACGAGACAAAATTCTGGAATTACTGGTCAAATAACTGATCTGAGTGAAAAGCTAGTAAATATTTTTGAGGCAGGCCAGCTATCTGTTTCTCCTCCACTATTTGATTTGCAAGCTCGCTTTACTTCGACAATAGAAGATTTTCAGAAGCAACTGGATTTGATGGTGAAGTACAATTGGGACTTTGATCATTACTTGGAAGAAGATGTTCCTGCAGCGATAGAATACATTCTAAAACAAAGCATGCCAAAAGACGGAAAATTGCTTGCAATTGGACATTCCATGGGAGGCATCTTGTTGTATTCAATGCTGGCACAGTCTGGTTTTGAAGGAAAAGAACCCAAATTTGCTGCAGTAGTTACACTGGCATCATCTCTGGACTACACATCATCCAAATCAACTTTGAAGTTACTCTTGCCTCTTGCAGATCCTGCACAGGCTCTGAGTGTCCCTGTTGTTCCTTTAGGGGCAATGTTGGTAGCAGCTTACGAGGTTTCATCCCGTTCACCATACGCATCGTCATGGTTAAATACTTTGATTTCAGCCGAGGGCATGATGGATCCTGATTTATTTAAAAGGCTGGTTTTGAATAACTTTTGCACCATACCCGCAAAACTTCTCTTACAACTCACAACAGCATTTCGAGAGCGTGGTTTATGTAATAGGGACGGGACATTTTTTTACAAGGACCATCTACACAAAAGCAATGTACCTATTTTAGCTATTGCTGGAGACATGGATCTGATTTGCCCACCTGAAGCTGTGGAAGATACCGTTAAACTAATTCCTGAGCACCTGGTTACGTATAAACTTTTTGGGGATCCCGAAGGCCCACATTATGCTCATTATGACTTGGTTGGAGGAAGAATGGCAGTGGAACAGGAATATCCTTGTATAGTTGAATTTCTTAGCTGTCACGACAAGTGA 1713 0.4308 MGIIQYDPIYSLCKVSSSTFRRFPRATVPFRLKAFSTGVHDKPSICTADELHYVSVSNSDWKLALWRYHPSPKAPPRNHPLLLLSGVGTNAVGYDLSPKSSFARHMSGQGFETWILELRGAGLSVQGSNSKDIEQSANAMSEKMEDVLENATNEPMSSKKELDNIAGAVSGPYNSASEGVETENVAVIGDLTRLATAWDESKLVARLSETFTSLSERVSGFLGESQAKVMSAKLLDQFSKLLVDSPLYEQFNEVRGKLATLLETRQNSGITGQITDLSEKLVNIFEAGQLSVSPPLFDLQARFTSTIEDFQKQLDLMVKYNWDFDHYLEEDVPAAIEYILKQSMPKDGKLLAIGHSMGGILLYSMLAQSGFEGKEPKFAAVVTLASSLDYTSSKSTLKLLLPLADPAQALSVPVVPLGAMLVAAYEVSSRSPYASSWLNTLISAEGMMDPDLFKRLVLNNFCTIPAKLLLQLTTAFRERGLCNRDGTFFYKDHLHKSNVPILAIAGDMDLICPPEAVEDTVKLIPEHLVTYKLFGDPEGPHYAHYDLVGGRMAVEQEYPCIVEFLSCHDK* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0342 570 PIRSF UCP031088_abhydr 7 570 IPR016969 -
Tpr1g0342 570 Gene3D alpha/beta hydrolase 49 144 IPR029058 -
Tpr1g0342 570 Gene3D alpha/beta hydrolase 310 567 IPR029058 -
Tpr1g0342 570 ProSitePatterns Prolyl endopeptidase family serine active site. 331 361 IPR002471 GO:0004252|GO:0006508
Tpr1g0342 570 PANTHER ALPHA/BETA HYDROLASE FAMILY PROTEIN 40 567 - -
Tpr1g0342 570 PANTHER LYSOSOMAL ACID LIPASE-RELATED 40 567 - -
Tpr1g0342 570 Coils Coil 134 154 - -
Tpr1g0342 570 SUPERFAMILY alpha/beta-Hydrolases 52 565 IPR029058 -
Tpr1g0342 570 Pfam alpha/beta hydrolase fold 325 544 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0342 Tpr-Chr1 2989445 2996423 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0342 1 2989445 2996423 Tpr1g0342 1 2989445 2996423 ECH