Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0335 ATGCCAACCCGTTACAATGGACCTGGTTTGTTTGGTAGACCACTTCACTCTGTCCTTGGTGGAGGAAAGATTGCTGATATCTTGCTATGGAAAGACAAGAAATTATCGGCAGCATTTGTAGCTGGATTTTCAATGGTTTGGTTTCTCTTTGAAGTAGTGGAATATAATCTTGTTACTCTTCTATGTCACATCCTCATAGCCCTTATGCTCATTCTCTTTGTTTGGCATAATGCAGCTGGACTAATCACATGGAGACTTCCTAATATCTATGATCTTGAAATCCCAGATTACACCGTTAGATTCCTTCATAATAAGTTTAACTTCTTCTTGAGAAAATTTTATGACATTGCAACTGGAAAAGATCTCAGATTCTTCTTTGTGACAATTGCTGGCCTATGGATCATGTCTACTATTGGAAATTTCTTCAGCACTGTCAATTTACTATATACAACATTTTTATGCTTGGTGACACTTCCCATTATGTATGAGAGGTATGAACATGAGGTGGATTATCTAGCAAGTAAAGGAAACCAAGATGTGAAGAGATTGTTCAATAAATTGGATTCAACAGTTCTCAACAGGATTCCAAGGGGACCAGTGAAAGAAAAGAAGTTAAGATGA 621 0.372 MPTRYNGPGLFGRPLHSVLGGGKIADILLWKDKKLSAAFVAGFSMVWFLFEVVEYNLVTLLCHILIALMLILFVWHNAAGLITWRLPNIYDLEIPDYTVRFLHNKFNFFLRKFYDIATGKDLRFFFVTIAGLWIMSTIGNFFSTVNLLYTTFLCLVTLPIMYERYEHEVDYLASKGNQDVKRLFNKLDSTVLNRIPRGPVKEKKLR* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0335 206 ProSiteProfiles Reticulon domain profile. 24 206 IPR003388 -
Tpr1g0335 206 Pfam Reticulon 24 175 IPR003388 -
Tpr1g0335 206 PANTHER RETICULON 10 204 IPR045064 GO:0009617
Tpr1g0335 206 PANTHER RETICULON-LIKE PROTEIN B14 10 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0335 Tpr-Chr1 2948721 2950184 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0335 1 2948721 2950184 Tpr1g0335 1 2948721 2950184 ECH