Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0329 ATGACTTCATTATATTTTTTCTGCTTCCTCTTGTATTGTCACTTCACGCTGATTTTATCAGCAGGGCATGGAAGCGGGTACCAATATAACTGTCCACGCTCATTCAGCTGTGGAGTTCGTGGGACTTTACGTTACCCTTTCACCAAGGTAGAACAACCAGACTGTGGCTCCATACTGATAAATGGCTGTGATGGCAGTTATTATTCACCCAAATTCATCAAACTGGACAAGAATGCAAAATCCATAGAGCTAACTAGTGTCATTGACAGCCAGCATACCATTACGATTTCTGATCAAGATTTTTACAAGCGATTGCAGAATAATGTTTGTGATGCTTTGAATCACAACTACACTCTTCCTCCCCCTTCTACTTTTGTTTCTTTTTATATAGATTATAACGTAACTCTCTTCCGATGCAATCATAACCACAATATCAATCCCCCAGCAAACTATTTTCAACACAAGTGTCCTAACTACGATATCTATTATTATAGTAAACCATATCCCAATGTTACTAAAGAGAAGGAACATAGCTTTTTCTCATCCTGCTTGCTACTTCAGTTTCCATCTAAAGATTTGACTGATACCAAAAACATTTTATCATTTGTATCTGGTCAGATGGTTATTAAAATAGTATTATCTCGTGATTGTGATGAGTGCTGCAACCATAGAGGAGGCCAATGTAGGCTTGATGCCAACAACATGTTCTACTGTGACAATGAGCCGAAGAAGAAGAGAAAATATTTTAAGCTGCTACTTGGACTTGGAATAGGTCTAAGCATTACATTGTTTGCACTGGGTGTTCTTATAATTCGATGCTGCTCCAGAAGAAAGCATGCTCCATCGGACCTCCAGAATCAATCGAGAAGCACATATACTGATGCGATTGATTCCTACCATAATCAAGGTCCAGAAAACGGCACTGTCTACTTTAAAATCCCTCTGTTCTCTTACAAGGAGCTAGAAGAAGCTACAAATAATTTCCACCACGCCAACCAACTTGGAAGCGGAGGCTTTGGAATAGTTTACTATGGAAAACTGCGAGATGGACGTGAAGTTGCTATTAAGCGCCCATATGAACATAACTGTAGGCGAGTAGAACAGTTCACAAATGAAATTGAGATCCTTGCTCGCACACGCCACACAAATCTTGTATCCCTCTATGGCTGTACTTCATATCATAGTGATGAACTACTGCTTGTCTACGAACATGTTCCGAATCACACTGTTGCTTGTCATCTCCACGGCGATTTAGCAAGGTCGGGCATACTTCCTTGGCATATAAGGATGAAAATTGCCATAGAGACAGCAAGTTCACTGGCTTATCTGCATGCTTCTGGCATCATCCACCGTGACGTGAAAACCAAAAACATTCTCCTTACAAACAACTTCAGTGTTAAAGTTGCAGATTTTGGTCTTTCAAGGCTATTCCCCCTCGATATCACCCATGCTTCCACGGCGCCACAAGGGACACCGGGTTACGTTGATCCAGAATATCATCAATGCTACCAGCTTACTAGCAAGAGTGATGTATACAGTTTCGGTGTTGTGCTCATTGAGCTAATATCATCTAAGCTTGCTGTTGATATGAACAGGCATAAGGATGAGATTAACTTGTCAAACCTGGCTTTAAAGAAGATCCAAAAGGGTGCACTTACTGAGTTGGTGGACCCTTATCTTGGTTTTGATTCAGACAATGAGGTTAAGAGGATGATAGTTTCAGTGGCAGAGTTGGCTTTTCAATGTTTGCAAAGGGAAAACGAATTGAGACCTTCCATGGATGAGGTTTTGAAGGTGTTGATGAGAATTGAAAGTGGGAAGGATGTGCCTGAGCATATAGTTGAAGAAGAGCGTCCACCCTCTCCACTTTCACCAGATGGGGATGAGATTGAGATTGAGATTGGATTATTCCAAAAAATGATGCCACAGCCATCACCTACAGCTGTGGTTGATAAATGGAATAGTCAATCTACTTCATGGAATACCAGTGGTCATTAA 1998 0.4094 MTSLYFFCFLLYCHFTLILSAGHGSGYQYNCPRSFSCGVRGTLRYPFTKVEQPDCGSILINGCDGSYYSPKFIKLDKNAKSIELTSVIDSQHTITISDQDFYKRLQNNVCDALNHNYTLPPPSTFVSFYIDYNVTLFRCNHNHNINPPANYFQHKCPNYDIYYYSKPYPNVTKEKEHSFFSSCLLLQFPSKDLTDTKNILSFVSGQMVIKIVLSRDCDECCNHRGGQCRLDANNMFYCDNEPKKKRKYFKLLLGLGIGLSITLFALGVLIIRCCSRRKHAPSDLQNQSRSTYTDAIDSYHNQGPENGTVYFKIPLFSYKELEEATNNFHHANQLGSGGFGIVYYGKLRDGREVAIKRPYEHNCRRVEQFTNEIEILARTRHTNLVSLYGCTSYHSDELLLVYEHVPNHTVACHLHGDLARSGILPWHIRMKIAIETASSLAYLHASGIIHRDVKTKNILLTNNFSVKVADFGLSRLFPLDITHASTAPQGTPGYVDPEYHQCYQLTSKSDVYSFGVVLIELISSKLAVDMNRHKDEINLSNLALKKIQKGALTELVDPYLGFDSDNEVKRMIVSVAELAFQCLQRENELRPSMDEVLKVLMRIESGKDVPEHIVEEERPPSPLSPDGDEIEIEIGLFQKMMPQPSPTAVVDKWNSQSTSWNTSGH* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0329 665 SUPERFAMILY Protein kinase-like (PK-like) 310 603 IPR011009 -
Tpr1g0329 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Tpr1g0329 665 ProSiteProfiles Protein kinase domain profile. 328 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0329 665 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 1 665 IPR044652 -
Tpr1g0329 665 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524
Tpr1g0329 665 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 1 665 - -
Tpr1g0329 665 Pfam Protein kinase domain 328 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0329 665 MobiDBLite consensus disorder prediction 645 665 - -
Tpr1g0329 665 SMART serkin_6 328 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0329 665 Gene3D Transferase(Phosphotransferase) domain 1 405 612 - -
Tpr1g0329 665 MobiDBLite consensus disorder prediction 648 665 - -
Tpr1g0329 665 Gene3D Phosphorylase Kinase; domain 1 301 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0329 Tpr-Chr1 2827857 2830676 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0329 33 665 Receptor kinase-like Gene Family AT1G25390 45.938 7.43e-160 472
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Tpr1g0329 Pkinase 2.9e-45 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0329 1 2827857 2830676 Tpr1g0329 1 2827857 2830676 ECH