Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0327 ATGGCTTTGCTTCATGTAGTGCATCATAGATTCCTTTTGTTCTCTCATTTAACTGTGCTGTTGCTACTACTTGTCTTAACTAGTAAAGGAAATGGACACAGTGATGATTGTCCAGAATCATTTGATTGTGGAAATCTTGGGATCATTAAATACCCTTTTACCAAGTTTGGATTCCACAACTGTGGTGCCTTGGAAATTCGAGGTTGTGATGATGATACCAACAGAACTGCAATGAAGACCATCCAGTTAACCAATGGAGGAAGACACTTTCAAGTTACAAACATTGTTAATGACCGGCGCAAGGGAAATACTATTTCCATTATTGACCACAATTTTACCAACCTTTTGAACAAAAGTGCTTGTGAGGCTTTCAGCTATAATAATATTAACCTCCCTCCTTCATCTCCTTTTGGATTATTTTATCTGAAAGACAATATAACTGCTGTCAAATGCAACCGTACCAAAAAATTATTCATCAACCCTCCACATAATTTCTTCAAAAATAGTTCTTGTAGTCACTATGATTTTTACTTCGGTGATTCGATATCTGATGCTGAGTCTAACAACTCTTTCGCGTCGTGCTCATCGTTTTATCTTCCCGTCACTGAATTAGGCTTTGCACTTTCTGGTAACCCGTTTCCATTTTTAGCTGATGAAATTACCTTTCAGTTCCAACAATCATATCAATGTGAACAGTGTCATCGTAATAGAAAAGGTCATTGTCGTATTGACAGCAACAAACGAGTTTATTGCGCTGCAAGGAAGGGTAGAAGTTTAATTTGGAAGCTAGGATTGATTTTAGGAGTCGGCATTGGACCATGGATCATAGTTGGATTGTTTGTCGCGCTACGGTACTATAAACGAAAATATGGCCCTGCACACATCCAATTCCAACCAAGCAACAACACTTATGTTGATCCTTATCCAAATCGTGAAATGGAGTCAAACAAGCTCTTCTTTGGGGTGCCTGTATTCTCCTATGAAGAGCTTCAACAAGCAACAAACAATTTCGACCGCACTAGAAAGCTAGGAGATGGAGGTTTTGGCACTGTTTACTATGGAAAACTCAAAGATGGAAGGGAGGTTGCTGTGAAACAATTATTTGAGCACAATTACAGGAGAGTAGAACAGTTTGTGAACGAAATCGAAATACTGGCTCGCTTGCGCCACAGGAACCTAGTGTCCCTCTATGGTTGCACTTCACGTTACAGCCGCGAGCTACTGCTTGTATATGAATACATTCCAAATGGAACTGTTGCTAGCCATCTCCATGGTGATTTAGCTAGAGCTGGTTTGCTGACATGGCCTATTCGAATGCAAATCGCAATAGAAACTGCTTCTGCATTGGCTTATCTACATGCTTCCGACATCATTCATCGTGATGTCAAAACCAACAACATTCTACTAGACATTAATTTTTCTGTAAAGGTAGCAGATTTTGGACTATCGAGGTTGTTCCCCAACGATGCCAGCCATGTCTCGACAGCTCCACAAGGAAGTCCAGGTTATCTTGATCCTGAATATTTTCAACTCTACAAGCTCTCAGTCAAGAGTGATGTGTATAGTTTTGGTGTGGTGCTCATTGAGCTAATATCATCTAGGACAGCAATTGATGCTGCCAGAGAAGGAGAGGAAATTAACTTAGCAAACTTAGCAGCTAAGAAGATAAGAAACGACGAAGTTGGAGAGCTGGTTGACCCATCACTTGGTTTTGAATCAGACAGTGAAGTTAAAAGGATGGTAAATTCAGTGGCAGAACTGGCTTTTCAATGTGTGCTAGGAGACATGGAATTAAGACCTTCTATGGATCAAGTTCTGCAAGAACTCAAGAAAATTGATGGTAGGAATTTTGAGTTTGATCATCTAGAAAAAGTACATGACTATGCTGGCTCCTCGCGCTCTAAAGAAGTACATCTACCAATAGTAGGAACTGCTATTGATAAGAAGCAAGAATCATCCTCTTCACCAAAGTCATTGACTGAGAAATGGGAAAGTAAATCTAATACACCCAATGCCGATGGTTAA 2025 0.4 MALLHVVHHRFLLFSHLTVLLLLLVLTSKGNGHSDDCPESFDCGNLGIIKYPFTKFGFHNCGALEIRGCDDDTNRTAMKTIQLTNGGRHFQVTNIVNDRRKGNTISIIDHNFTNLLNKSACEAFSYNNINLPPSSPFGLFYLKDNITAVKCNRTKKLFINPPHNFFKNSSCSHYDFYFGDSISDAESNNSFASCSSFYLPVTELGFALSGNPFPFLADEITFQFQQSYQCEQCHRNRKGHCRIDSNKRVYCAARKGRSLIWKLGLILGVGIGPWIIVGLFVALRYYKRKYGPAHIQFQPSNNTYVDPYPNREMESNKLFFGVPVFSYEELQQATNNFDRTRKLGDGGFGTVYYGKLKDGREVAVKQLFEHNYRRVEQFVNEIEILARLRHRNLVSLYGCTSRYSRELLLVYEYIPNGTVASHLHGDLARAGLLTWPIRMQIAIETASALAYLHASDIIHRDVKTNNILLDINFSVKVADFGLSRLFPNDASHVSTAPQGSPGYLDPEYFQLYKLSVKSDVYSFGVVLIELISSRTAIDAAREGEEINLANLAAKKIRNDEVGELVDPSLGFESDSEVKRMVNSVAELAFQCVLGDMELRPSMDQVLQELKKIDGRNFEFDHLEKVHDYAGSSRSKEVHLPIVGTAIDKKQESSSSPKSLTEKWESKSNTPNADG* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0327 674 Pfam Protein tyrosine and serine/threonine kinase 340 609 IPR001245 GO:0004672|GO:0006468
Tpr1g0327 674 SMART serkin_6 337 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0327 674 ProSiteProfiles Protein kinase domain profile. 337 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0327 674 MobiDBLite consensus disorder prediction 647 674 - -
Tpr1g0327 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Tpr1g0327 674 Gene3D Transferase(Phosphotransferase) domain 1 414 621 - -
Tpr1g0327 674 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524
Tpr1g0327 674 CDD STKc_IRAK 343 612 - -
Tpr1g0327 674 PANTHER WALL-ASSOCIATED KINASE-LIKE PROTEIN 23 673 - -
Tpr1g0327 674 Gene3D Phosphorylase Kinase; domain 1 309 413 - -
Tpr1g0327 674 MobiDBLite consensus disorder prediction 645 674 - -
Tpr1g0327 674 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 23 673 IPR044652 -
Tpr1g0327 674 SUPERFAMILY Protein kinase-like (PK-like) 316 609 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0327 Tpr-Chr1 2816013 2822362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0327 39 674 Receptor kinase-like Gene Family AT1G25390 44.547 4.65e-159 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Tpr1g0327 PK_Tyr_Ser-Thr 6.7e-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0327 1 2816013 2822362 Tpr1g0327 1 2816013 2822362 ECH