Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0321 ATGGCGTCTACACTCTCTCCCTACATTCTTCTTCTTCTTTTCTCTTCCCATTTTGTCCTCATTGTTCATTCTTCCACAAACCCAGATTTAGAATCTCTTATATCTTTCAAAACACTTTCAGACCCATCAAAAAAGCTCACAACTTGGAAAACCGGAACTGACCCATGCACTTGGACCGGCGTTTCATGCGTCAAAAACCGAGTCACTCGACTCGTTCTCGAAAATCTAAACTTACAAGGCTCCATTGAACCATTAACTTCTTTAACTCAGCTTCGAGTTTTAAGTCTCAAAGGAAACCGGTTTTCCGGTTCACTTCCAACTCTCTCCAACTTCACTTCTCTTAAGCTTCTATTTTTATCTAACAACCGTTTCTCCGGCGAGTTTCCGTCGACGGTGACGTCACTTTTCCGTCTCTACCGTCTCGATCTGTCGAATAACAACTTCTCCGGCGAGATTCCGGCGAAGGTCAACCGTTTGACTCACCTCCTCACTCTCCGTCTTAACGAGAATCAGTTCTCCGGTCTCATTCCTGAACTTCACCTTCCTAACCTTCAAGACTTTAACGTCTCCGGGAATATTCTCTCCGGCGAGATACCGGAAACCTTATCAGGTTTCTCCGGTTCATCTTTCGGGCAAAACCCGTTTCTTTGTGGTGCTCCGTTGAAGAAATGTGAAGCCGAACCGAGCAAACCGGGTTCTGAAGGTGCCATTGCTTCACCATTGGTACCAAGTAGTAGAATTCCAACCGTTTCATCTTCACCAAGCACAATGCCAACAACAACACCAACAACAAACGTTAAAAGCCATGAAAAAAGAGGTTCTAAAATGAGTCCTATAGTTTTGATAGCTATTATAGTTGGTGATGTTTTTGTTCTTGGAATAGTGTGTTTACTTCTTTATTGCTATTTTTGGAGAAACTATTCTTCAAAATCAAAGGAAGAAAAAAAGGGGTTGAAACTATTTGAGAGTGAAAAGATAGTGTATTCATCAAGTCCATACCCTACACAAGGAGGGTTTGAGAGGGGTAGAATGGTATTTTTTGAAGGAGAGAAAAGATTTGAACTTGAGGATTTGTTACGTGCTTCTGCTGAAATGCTTGGGAAAGGTGGATTTGGAACTGCTTATAAAGCTGTTCTTGATGATGGAAATGTTGTTGCTGTGAAGAGGTTGAAAGATGCACAGATTGCAGGGAAGAGAGAATTTGAACAGCATATGGAAGTTCTTGGAAGGATTAGGCACCCAAATGTTGTTAGTTTAAGGGCTTATTATTTTGCAAGAGAAGAGAAGTTATTAGTGTATGATTACATGCCTAATGCAACTTTGTTCTGGCTTCTTCATGGAAACAGAGGACCAGGAAGAACCCCACTGGATTGGACCACAAGGCTCAAGATAGCAGCTGGAGCTGCTAAAGGAGTAACTTTCATTCATAACTCGTGCAAATCCCTTAAACTCACTCATGGTAACATTAAATCCACCAACATACTTCTTGACAAGCAAGGAAATGCACGAGTATCGGATTTTGGGCTATCAATTTTCAACGGCCCAAGCCCGTCAGGAGCTGGTAACAGGCCAAACGGCTACCGTGCTCCTGAGGTTTTAGATGGTCGAAAACAATCCCAAAAATCTGATGTGTACTCTTTCGGTGTTCTGTTGTTAGAGATGCTGACAGGAAAGTGTCCGTCTGCTGGGGAGAGTGGTGGAAGTGGTTATGGTGGGGGTGTGATTGATCTTCCTAGGTGGGTGCAATCAGTAGTTAGAGAGGAATGGACTGCTGAAGTTTTTGATTTGGAGTTGATGAGGTATAAGGATATTGAAGAGGAAATGGTTGGATTGCTTCAGATTGCTATGTCGTGTACCGCTGCTTCACCTGATCAACGGCCAAGGATGTCACACGTTCTTAAGATGATTGAGGACTTGCGTGGGGTCGAGGTGTCTCCCTGTCATGACACGGTGGAATCTGTCTCCGATTCACCTTCATTGTCTGAAGATGCCTGTGCTGGTACTGCTAGTCAGTAA 2016 0.433 MASTLSPYILLLLFSSHFVLIVHSSTNPDLESLISFKTLSDPSKKLTTWKTGTDPCTWTGVSCVKNRVTRLVLENLNLQGSIEPLTSLTQLRVLSLKGNRFSGSLPTLSNFTSLKLLFLSNNRFSGEFPSTVTSLFRLYRLDLSNNNFSGEIPAKVNRLTHLLTLRLNENQFSGLIPELHLPNLQDFNVSGNILSGEIPETLSGFSGSSFGQNPFLCGAPLKKCEAEPSKPGSEGAIASPLVPSSRIPTVSSSPSTMPTTTPTTNVKSHEKRGSKMSPIVLIAIIVGDVFVLGIVCLLLYCYFWRNYSSKSKEEKKGLKLFESEKIVYSSSPYPTQGGFERGRMVFFEGEKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGNVVAVKRLKDAQIAGKREFEQHMEVLGRIRHPNVVSLRAYYFAREEKLLVYDYMPNATLFWLLHGNRGPGRTPLDWTTRLKIAAGAAKGVTFIHNSCKSLKLTHGNIKSTNILLDKQGNARVSDFGLSIFNGPSPSGAGNRPNGYRAPEVLDGRKQSQKSDVYSFGVLLLEMLTGKCPSAGESGGSGYGGGVIDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQIAMSCTAASPDQRPRMSHVLKMIEDLRGVEVSPCHDTVESVSDSPSLSEDACAGTASQ* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0321 671 Gene3D Ribonuclease Inhibitor 85 231 IPR032675 -
Tpr1g0321 671 PANTHER - 23 654 - -
Tpr1g0321 671 SUPERFAMILY L domain-like 40 206 - -
Tpr1g0321 671 ProSiteProfiles Protein kinase domain profile. 360 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0321 671 MobiDBLite consensus disorder prediction 651 671 - -
Tpr1g0321 671 MobiDBLite consensus disorder prediction 248 270 - -
Tpr1g0321 671 ProSitePatterns Protein kinases ATP-binding region signature. 366 398 IPR017441 GO:0005524
Tpr1g0321 671 MobiDBLite consensus disorder prediction 248 267 - -
Tpr1g0321 671 Gene3D Phosphorylase Kinase; domain 1 340 435 - -
Tpr1g0321 671 Gene3D Ribonuclease Inhibitor 20 84 IPR032675 -
Tpr1g0321 671 Gene3D Transferase(Phosphotransferase) domain 1 436 654 - -
Tpr1g0321 671 SUPERFAMILY Protein kinase-like (PK-like) 364 636 IPR011009 -
Tpr1g0321 671 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 23 654 - -
Tpr1g0321 671 Pfam Protein kinase domain 363 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0321 671 Pfam Leucine rich repeat N-terminal domain 27 63 IPR013210 -
Tpr1g0321 671 CDD STKc_IRAK 366 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0321 Tpr-Chr1 2764847 2768440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0321 29 671 Receptor kinase-like Gene Family AT1G68400 66.313 0.0 825
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tpr1g0321 Pkinase 2.4e-37 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0321 1 2764847 2768440 Tpr1g0321 1 2764847 2768440 ECH