Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0320 ATGTCAGAAAAAATGAAGGGCTCAAATAATCAATATACATCAAAGATTTTCAATGTTCAACTTCACTTTATTAGTTTTCTCACCTATAGTCTAATTTTGGTATTTGGTTTAACACTTGGAATAATGATAAGTTTCTATCTCAAAGAGTGTACATTTAGTCTACAATTCACTCAGTTTTCTATACCAAGAACACAACCTTTGTCGCCGCCGATTGCTGTGAAACAAGAACGTGTTGGATTGAAGGATTTTCTTAAACCTCCTCCTATTATGCATGATATGGATGATGAAGAATTGTTATGGAGAGCTTCTGTGGCTGCAAAAATACCTGATTACCCTTTTGAACGAATTCCTAAGGTTGCTTTCATGTTTTTGACAAAAGGTCCTGTGTTTTTGGCACCTTTGTGGGAACAGTTTTTTAAAGGACATGAAGGGTATTACTCTATTTATGTGCATTCTAATCCTTCTTATAATGGATCACACCCTGAGAGTCCTGTTTTTCATGGCAGAAGAATTCCTAGTAAGGAAGTTCAATGGGGAAATGTTAACATGATTGAAGCGGAGCGTCGCTTACTAGCGAATGCACTTCTCGATATCTCAAACCAACGATTTGTTCTTGTATCAGAATCTTGCATACCACTCTTCAACTTCTCAACAATCTACTCTTACTTAATAAACTCTACACAAAACTATGTTATGGCTTATGATGATCCTAGCCCGGTTGGTCGCGGCCGTTATAGCATCCAGATGTTACCTGAGGTTTCCCTCAATCAATGGAGAAAAGGGTTCCAATGGTTTGAAATGGACAGAGATCTTGCTCTAGGAGTTGTATCTGATAGAATATACTTCCCAGTTTTTCAGCAGTATTGCAAAGGTTCATGTTATGCAGATGAACATTACTTGCCAACTTTTGTTAGCATAAAGTTTTGGGAAGGAAATTCAAATAGGAGTTTGACTTGGGTTGACTGGTCAAAAGGGGGTCCACATCCAGCTCATTTTTTAAGGTCTGATGTTAATGTTGAGTTTTTGGAGAGATTGAGGAGCAAGAAATGTGAGTATAATAATGGAAACAGCACCAATGCTTGTTATCTGTTTGCTAGGAAGTTCTTGCCTAGTACATTGTCAAAGCTCTTGAAGATTGCACCTGAGGTTATGCATTTTGAACACTATGATAGGCCTAAAAAACAGAAACTTATCACTAAAATTTAA 1206 0.3715 MSEKMKGSNNQYTSKIFNVQLHFISFLTYSLILVFGLTLGIMISFYLKECTFSLQFTQFSIPRTQPLSPPIAVKQERVGLKDFLKPPPIMHDMDDEELLWRASVAAKIPDYPFERIPKVAFMFLTKGPVFLAPLWEQFFKGHEGYYSIYVHSNPSYNGSHPESPVFHGRRIPSKEVQWGNVNMIEAERRLLANALLDISNQRFVLVSESCIPLFNFSTIYSYLINSTQNYVMAYDDPSPVGRGRYSIQMLPEVSLNQWRKGFQWFEMDRDLALGVVSDRIYFPVFQQYCKGSCYADEHYLPTFVSIKFWEGNSNRSLTWVDWSKGGPHPAHFLRSDVNVEFLERLRSKKCEYNNGNSTNACYLFARKFLPSTLSKLLKIAPEVMHFEHYDRPKKQKLITKI* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0320 401 Pfam Core-2/I-Branching enzyme 119 345 IPR003406 GO:0016020|GO:0016757
Tpr1g0320 401 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 13 60 IPR044174 GO:0016757
Tpr1g0320 401 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 71 386 IPR044174 GO:0016757
Tpr1g0320 401 PANTHER CORE-2/I-BRANCHING ENZYME 13 60 - -
Tpr1g0320 401 PANTHER CORE-2/I-BRANCHING ENZYME 71 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0320 Tpr-Chr1 2762252 2764510 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0320 1 2762252 2764510 Tpr1g0320 1 2762252 2764510 ECH