Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0318 ATGGGTTCAAAAATGGAAGGAACCTCTACACCAGCAAATCGACGTGATCCTTATGAAGTATTGTCCGTTTCAAAGGAATCAACCGATCAGGAAATTAAAACCGCTTACAGAAAGCTTGCTCTCAAGTATCACCCTGACAAAAATGCCAGCAATCCTGAAGCTTCAGAATTATTCAAAGAGGTTGCATATTCTTATAGTATCTTATCTGACCCAGAGAAGAGAAGGCAGTATGATAGTGCAGGATTTGAGGCACTTGATGCTGATAGCATGGACATGGAAATTGATTTATCTAATCTTGGGACTGTGAACACGATGTTTGCAGCTTTATTCAGTAAGCTGGGTGTCCCTATCAAGACTACCATTTCAGCTAATGTTCTTGAAGAAGCTTTGAATGGCACAGTTACAGTCAGACCCCTTCCAATTGGAGCATCAGTTAGTGGAAAGGTAGAGAAGCAATGTGCTCATTTTTTTGGTGTGACAATCAATGAGCAGCAAGCTGAGTCGGGGATTGTAGTAAGAGTTACTTCAACTGCACAAAGCAAATTCAAGTTGCTCTATTTCGAACAAGATGTAAATGGTGGCTATGGTTTGGCTTTGCAGGAAGATAGTGAGAAAACTGGCAAGGTGACATCTGCAGGAATGTATTTCTTACATTTTCAAGTGTACAGAATGGATTCAACTGTGAATGCGTTAGCAATGGCCAAGGATCCTGAAGGGGCTTTCTTTAAAAGGTTGGAAGGTCTTCAACCTTGCGAAGTCTCGGAATTAAAGCCTGGCACACATATATTTGCTGTTTATGGAGATAACTTCTTTAAGACTGCTAGCTATACAATTGAAGCAGTATGTGCAAAATCACATGAAGATACCACCCAAAAACTTAAGGACATTGAGGCTCAAATTTTAAGAAAGAGGAATGAGCTGCGCCAATTTGAATCAGAATATAGAAAGGCATTGGCACGCTATCAGGAAGTGACAGAAAGATATGCAAAAGAAAAACAGTCTGTAGACGAGCTTCTGAAACAAAGGGACGGTATCCATTCTACTTTCACCATTGCTAAGCCATCCAGTATTAGTGCAAGTGGTAGTAATTTAAGCAACGGAAGTTCTAGTAAAATTTCTGGTGATGATTCCAAAGGTGAGAGCCCTGGGGAAGATGGAGGGTCGGATGGAAAGGATAAATCAGGCAAAAAGAAATGGTTCAACCTTAATCTTAAGGGTTCGGGCTCGGGTTCTGATAAGAGGTTGATTTAA 1251 0.4069 MGSKMEGTSTPANRRDPYEVLSVSKESTDQEIKTAYRKLALKYHPDKNASNPEASELFKEVAYSYSILSDPEKRRQYDSAGFEALDADSMDMEIDLSNLGTVNTMFAALFSKLGVPIKTTISANVLEEALNGTVTVRPLPIGASVSGKVEKQCAHFFGVTINEQQAESGIVVRVTSTAQSKFKLLYFEQDVNGGYGLALQEDSEKTGKVTSAGMYFLHFQVYRMDSTVNALAMAKDPEGAFFKRLEGLQPCEVSELKPGTHIFAVYGDNFFKTASYTIEAVCAKSHEDTTQKLKDIEAQILRKRNELRQFESEYRKALARYQEVTERYAKEKQSVDELLKQRDGIHSTFTIAKPSSISASGSNLSNGSSSKISGDDSKGESPGEDGGSDGKDKSGKKKWFNLNLKGSGSGSDKRLI* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0318 416 MobiDBLite consensus disorder prediction 356 376 - -
Tpr1g0318 416 SUPERFAMILY Chaperone J-domain 12 86 IPR036869 -
Tpr1g0318 416 Pfam DnaJ domain 16 78 IPR001623 -
Tpr1g0318 416 PANTHER CHAPERONE PROTEIN DNAJ 15-LIKE 2 408 - -
Tpr1g0318 416 ProSiteProfiles dnaJ domain profile. 16 81 IPR001623 -
Tpr1g0318 416 MobiDBLite consensus disorder prediction 1 24 - -
Tpr1g0318 416 PRINTS DnaJ domain signature 18 36 IPR001623 -
Tpr1g0318 416 PRINTS DnaJ domain signature 36 51 IPR001623 -
Tpr1g0318 416 PRINTS DnaJ domain signature 53 73 IPR001623 -
Tpr1g0318 416 PRINTS DnaJ domain signature 73 92 IPR001623 -
Tpr1g0318 416 CDD DnaJ 16 70 IPR001623 -
Tpr1g0318 416 Coils Coil 286 341 - -
Tpr1g0318 416 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 2 408 - -
Tpr1g0318 416 MobiDBLite consensus disorder prediction 356 416 - -
Tpr1g0318 416 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Tpr1g0318 416 SMART dnaj_3 15 73 IPR001623 -
Tpr1g0318 416 MobiDBLite consensus disorder prediction 377 399 - -
Tpr1g0318 416 Gene3D DnaJ domain 2 98 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0318 Tpr-Chr1 2746304 2752800 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0318 7 88 C2H2 Transcription Factor Family AT1G74250 43.678 4.13e-14 72.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0318 1 2746304 2752800 Tpr1g0318 1 2746304 2752800 ECH