Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0317 ATGGATAACAACCACCATGACCACTACAATAATAAAACTTCCCAAACACGCCTTAAACTCTTTGGCTTCAACGTCCAAGAAGACGAAACCATGCATGATAATAATTTTCATGACTCCTCAACAACCAAACCAACTTCCTCTTCAACTTCAACTTCTCCATCAAGATCACCAGACTCCACCGTCGGTGAAACTTTTCCACCTTCCTCCGGTGAAAGAAAATACGAGTGTCAATATTGTTGTAGAGAATTTGCAAATTCACAAGCACTTGGTGGACACCAAAACGCACATAAAAAAGAACGTCAACAACTTAAACGTGCTCAATTACAAGCTAACCGAAACGCCGCCGTTTCGTTCGTTCGAAATCCTATCATCTCCGCCTTCGCTCCTGCGCCTCATCTATTAGCTCCGCCGGGGTCCATGATGGTTCCATCTTCAACTTCTTCGTGGGTTTACGTTCCACCACGATCCGCTCCTCCTCCGTTCCACGTGTCAGTATCACACGGTTGTGTTTTCCCGTCGGTGAACGGAACCACCATGATGAGCGGTGGTGGTAACAATAATAATAGTAATAATAGTAATCATAATATTGGTGTAAGAGGGGTGAAATCTGCGGGTGCAGGGATGTTTCCGTGTGTTGGCGTTGTAGGGGATTCTACGTCTACATTGTCAACGATGCAGGTACAAGCCCGGGCCCACCATGTCAGGATGGATGGGCCATGTTTGAGTAGGTTCTCAAAAGGTGATAGCGGGCCCAATTTTGATGATGCATTGGGCTTGGATTTGCATCTTAGTCTTGCGCCGGCTGTGAATCGATCTTACGGCTCGGCTCAGCTTGGTTTTTCTAGATACTCATCTTAA 858 0.4604 MDNNHHDHYNNKTSQTRLKLFGFNVQEDETMHDNNFHDSSTTKPTSSSTSTSPSRSPDSTVGETFPPSSGERKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQANRNAAVSFVRNPIISAFAPAPHLLAPPGSMMVPSSTSSWVYVPPRSAPPPFHVSVSHGCVFPSVNGTTMMSGGGNNNNSNNSNHNIGVRGVKSAGAGMFPCVGVVGDSTSTLSTMQVQARAHHVRMDGPCLSRFSKGDSGPNFDDALGLDLHLSLAPAVNRSYGSAQLGFSRYSS* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0317 285 PANTHER ZINC FINGER PROTEIN GIS3 10 268 - -
Tpr1g0317 285 ProSitePatterns Zinc finger C2H2 type domain signature. 76 96 IPR013087 -
Tpr1g0317 285 ProSiteProfiles Zinc finger C2H2 type domain profile. 74 101 IPR013087 -
Tpr1g0317 285 MobiDBLite consensus disorder prediction 37 66 - -
Tpr1g0317 285 MobiDBLite consensus disorder prediction 33 68 - -
Tpr1g0317 285 SUPERFAMILY beta-beta-alpha zinc fingers 70 101 IPR036236 -
Tpr1g0317 285 Gene3D Classic Zinc Finger 49 121 - -
Tpr1g0317 285 PANTHER ZINC FINGER PROTEIN 5 10 268 IPR044299 GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0317 Tpr-Chr1 2735703 2737055 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0317 9 268 C2H2 Transcription Factor Family AT1G68360 43.796 7.52e-52 168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0317 1 2735703 2737055 Tpr1g0317 1 2735703 2737055 ECH