Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0311 ATGAACGCACCGCTCGATCTCTTTCTAAACATCGGTTTAGATGAACGCACCGCTCGTAACACCATCGCCAATAACAAAGTCACCAATAATCTCACTGCCGTTATCCACGAGGCTGGTGTTGCCGATGGTTGCAGCAGAACTGTTGGAAACCTAATTTATACGGTTGCAACTAAGTATTCTGGAAATGCGTTGCTGCATCGCCCTACATTGCTCGAATACATTGTTTCGTCCAAGGTGAAAACAACGGCGCAATTAGATGCAGCGCTCTCATTTCTTGCTACCACGGGTTCGGAGAACCTTGATTTGAATAAATTTGAAGCAGCATGTGGTGTTGGTGTTGAGGTTTCAACAGAAGATATCAATCGTGCTGTTAACGAAGTTTTTGAGGAGAATAAAGCTTCAATTCTGGAACTACGCTATCGAACAAATGTTGGGGAGTTACTTGGGCATGTGCGAAAGAGGCTCCCGTGGGCTGATGCAAAAGCTGTCAAGCAACTCGCCGATACAAAATTATATGAGCTACTGGGTGATAAAACAGCAGCAGACAATGAAAAGCCTTCTAAAAAGAAGAAAGAGAAACCTGCTAAAGATAAGGCGGCACCTATTGCTACTCCTGAAAAGCCACCCGAAGAAGATCTCAATCCATTTTTGATATTCCCTAACCCAGAGGATAATTTGAAGGTGCATACTGAAGTTCCTTTTAGTAATGGTACTATCCTGAGATGTTGCAATACAAAGGCGCTTCTTGACAAGCACTTGAAAGCAACTGGCGGGAAAGTTTTGACCCGGTTTCCTCCTGAGCCAAATGGATATTTGCATATTGGTCATGCCAAGGCAATGTTTATTGATTTTGGGTTGGCAAAAGACAGAGATGGAGGCTGCTACCTGAGGTATGATGATACAAATCCTGACACAGAAAAGAAAGAGTATATTGATCACATTGAAGAAATTGTCCAGTGGATGGGCTGGAAACCATTCAAGATTACTTACACAAGTGATTATTTCCAAGAACTGTATGAATTAGCTGTGGAGCTCATAACTAGGGGTTGTGCATATGTTGATCATCAGACACCTGATGAGATAAAGGAGTATAGGGAGAAGAAATTGAACAGTCCTTGGAGAGACAGACCAATTTCAGAATCATTGAAACTTTTTGAGGATATGAGATGTGGTCTTATAGAAGAAGGAAAAGCGACACTTCGAATGAAGCAAGACATGCAGAGTGATAATTTCAATATGTATGACCTTATTGCATATCGAATTAAGTTTACTCCACATCCTCATGCTGGAGACAAATGGTGCATCTATCCAAGTTATGATTATGCTCACTGCATTGTGGATTCACTTGAGAATGTCACACATTCACTGTGTACTCTTGAGTTTGAGACACGCCGTGCTTCATACTATTGGTTGTTACATGCATTAGGTATTTACCAACCTTATGTATGGGAGTATTCAAGGTTGAATGTCTCTAACACAGTAATGTCGAAGCGCAAGCTTAATCGTCTGGTGACTGAAAAGTGGGTTGATGGGTGGGATGATCCTCGGCTGATGACATTAGCTGGTTTGCGGCGTAGAGGCATGACTTCAACAGCAATCAATTCCTTTGTTCGAGGAATTGGAATCACTAGAAGTGATGGCACTTTGATATCTGTTAGTCGCCTTGAATATCATGTTAGGGAAGAATTGAACAAAACAGCTCCTCGGACAATGGTTGTCCTGCACCCACTCAAGGTTGTTATAACTAATCTTGAAGCCAACTCAACAATTGAGGTTGACGGGAAAAAATGGCCTGATGCTCAAGCTGATGATCCATCTGCTTTCTACAAGATTCCGTTTTCCAATGTTGTATATATTGAACGTACGGATTTCCGTATGCAAGATTCAAAAGATTATTATGGCCTTGCCCCTGGTAAATCAGCGATACTCAGATATGCATTTCCTATAAAGTGCACTGAAGTTATTCTAGCTGATGATAATGAGACTATTCTTGAAATTCGGGCCGAGTATGATCCTTCAAAGAAGACAAAGCCCAAGGGTGTTCTCCACTGGGTTGCACAACCTTCTCATGAAGTTGATCCATTGAAGGTCGAAGTCAGGCTGTTTGAGAGGCTGTTCCTATCAGAGAATCCTGCTGAACTTGGTGACAATTGGCTTGACGATCTGAACCCTCATTCCAAAGAGCTAATTCCAAATGCATTTGGTTTGTCCTCACTCCGGGATGCAAAGGTTGGAGACAGTTTCCAGTTTGAGAGATTAGGCTATTTTGTGGTCGACAAGGACTCTACTCCAGAAAAACTTGTTTTTAATAGAACAGTCACATTGAAGGACAACTATGGTAAGGGTGGAAAATAG 2355 0.4195 MNAPLDLFLNIGLDERTARNTIANNKVTNNLTAVIHEAGVADGCSRTVGNLIYTVATKYSGNALLHRPTLLEYIVSSKVKTTAQLDAALSFLATTGSENLDLNKFEAACGVGVEVSTEDINRAVNEVFEENKASILELRYRTNVGELLGHVRKRLPWADAKAVKQLADTKLYELLGDKTAADNEKPSKKKKEKPAKDKAAPIATPEKPPEEDLNPFLIFPNPEDNLKVHTEVPFSNGTILRCCNTKALLDKHLKATGGKVLTRFPPEPNGYLHIGHAKAMFIDFGLAKDRDGGCYLRYDDTNPDTEKKEYIDHIEEIVQWMGWKPFKITYTSDYFQELYELAVELITRGCAYVDHQTPDEIKEYREKKLNSPWRDRPISESLKLFEDMRCGLIEEGKATLRMKQDMQSDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSLENVTHSLCTLEFETRRASYYWLLHALGIYQPYVWEYSRLNVSNTVMSKRKLNRLVTEKWVDGWDDPRLMTLAGLRRRGMTSTAINSFVRGIGITRSDGTLISVSRLEYHVREELNKTAPRTMVVLHPLKVVITNLEANSTIEVDGKKWPDAQADDPSAFYKIPFSNVVYIERTDFRMQDSKDYYGLAPGKSAILRYAFPIKCTEVILADDNETILEIRAEYDPSKKTKPKGVLHWVAQPSHEVDPLKVEVRLFERLFLSENPAELGDNWLDDLNPHSKELIPNAFGLSSLRDAKVGDSFQFERLGYFVVDKDSTPEKLVFNRTVTLKDNYGKGGK* 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0311 784 CDD GlnRS_core 259 569 - -
Tpr1g0311 784 MobiDBLite consensus disorder prediction 182 211 - -
Tpr1g0311 784 TIGRFAM glnS: glutamine--tRNA ligase 260 781 IPR004514 GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425
Tpr1g0311 784 Gene3D - 2 113 IPR042558 -
Tpr1g0311 784 Gene3D Ribosomal Protein L25; Chain P 571 690 IPR020056 -
Tpr1g0311 784 ProSitePatterns Aminoacyl-transfer RNA synthetases class-I signature. 266 277 IPR001412 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Tpr1g0311 784 PANTHER GLUTAMINE-TRNA LIGASE 5 783 - -
Tpr1g0311 784 Pfam Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 5 160 IPR007639 GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418
Tpr1g0311 784 Pfam tRNA synthetases class I (E and Q), catalytic domain 259 564 IPR020058 GO:0004812|GO:0005524|GO:0043039
Tpr1g0311 784 SUPERFAMILY Ribosomal protein L25-like 567 778 IPR011035 GO:0006412
Tpr1g0311 784 MobiDBLite consensus disorder prediction 182 205 - -
Tpr1g0311 784 PRINTS Glutamyl-tRNA synthetase signature 263 275 IPR000924 GO:0000166|GO:0004812|GO:0005524|GO:0043039
Tpr1g0311 784 PRINTS Glutamyl-tRNA synthetase signature 292 305 IPR000924 GO:0000166|GO:0004812|GO:0005524|GO:0043039
Tpr1g0311 784 PRINTS Glutamyl-tRNA synthetase signature 437 447 IPR000924 GO:0000166|GO:0004812|GO:0005524|GO:0043039
Tpr1g0311 784 Pfam Glutaminyl-tRNA synthetase, non-specific RNA binding region part 2 163 235 IPR007638 GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425
Tpr1g0311 784 Gene3D - 114 183 IPR042559 -
Tpr1g0311 784 Gene3D Ribosomal Protein L25; Chain P 691 777 IPR020056 -
Tpr1g0311 784 Gene3D HUPs 234 570 IPR014729 -
Tpr1g0311 784 SUPERFAMILY Nucleotidylyl transferase 259 573 - -
Tpr1g0311 784 Pfam tRNA synthetases class I (E and Q), anti-codon binding domain 567 759 IPR020059 GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418
Tpr1g0311 784 PANTHER OS05G0182800 PROTEIN 5 783 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0311 Tpr-Chr1 2680264 2689840 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0311 1 2680264 2689840 Tpr1g0311 1 2680264 2689840 ECH