Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0308 ATGATTTGCACAGTTAGTGAAAGAATAAAAATGGAGTATCACAAAATCCAGTTAGTGACTATAGTCTCATTCATATTTTTGTTTCAAAACATTCATGGTTGGGGAGAAGAAGGGCATTACATTACTTGTAAGATCGCTCAGTCTCGCCTCAGCGATACAGCTGCAGAGGCTGTGAAAAAATTGCTGCCAGATTATGCACAAAATGACTTGGCAAGTGTGTGTACATGGGCTGATCGTGTAAAGTTTTATCTTCGTTGGTCGTCTCCTTTGCACTATGCCGATACACCTCCTCGTCTTTGCAATTTCCAGTATGACAGGGATTGCAAGGATTTGGATGGTGTGAAAGGAAGATGTGTTGTGGGAGCCATTAACAATTACACCACCCAGCTTCTTGACTATGGCAAAGACACTCAATATAACCTCACTCAAGCGCTTCTTTTCCTTTCTCATTTTTTCGGAGATGTCCATCAGCCTCTACATACAGGTTTTACCACAGACAAGGGAGGAAATTTAATTAATGTTCATTGGTACAGAAGGAAGCAAAATCTTCACCATGTTTGGGATGCTAACATAATTGAAACAGCAGAAGAAAGATTCTATAACACTAACAGGGATGATTTGATCAGTGCCATTCAAGACAATATCACGAAAACATGGTCGGATGAAGTGGCGGGATGGGAAGCCTGCAGTTCTGATGAGACCACATGCCCAAATACGTATGCATCTGAAGGTATTAAGGCAGCCTGTCAATGGGCATATAAAGATGCCCCTGAAGGTTCTGTACTAGAAGATGATTACTTCCTATCGCGTTTGCCAATAGTCAATATGCGATTAGCTCAAGGGGGAGTTCGATTGGCAGCCACCCTCAATCGTATTTTTAAGTGA 885 0.4169 MICTVSERIKMEYHKIQLVTIVSFIFLFQNIHGWGEEGHYITCKIAQSRLSDTAAEAVKKLLPDYAQNDLASVCTWADRVKFYLRWSSPLHYADTPPRLCNFQYDRDCKDLDGVKGRCVVGAINNYTTQLLDYGKDTQYNLTQALLFLSHFFGDVHQPLHTGFTTDKGGNLINVHWYRRKQNLHHVWDANIIETAEERFYNTNRDDLISAIQDNITKTWSDEVAGWEACSSDETTCPNTYASEGIKAACQWAYKDAPEGSVLEDDYFLSRLPIVNMRLAQGGVRLAATLNRIFK* 295
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0308 294 Pfam S1/P1 Nuclease 34 294 IPR003154 GO:0003676|GO:0004519|GO:0006308
Tpr1g0308 294 Gene3D P1 Nuclease 34 294 IPR008947 GO:0016788
Tpr1g0308 294 CDD S1-P1_nuclease 34 293 IPR003154 GO:0003676|GO:0004519|GO:0006308
Tpr1g0308 294 PANTHER ENDONUCLEASE 2 12 294 - -
Tpr1g0308 294 SUPERFAMILY Phospholipase C/P1 nuclease 34 292 IPR008947 GO:0016788
Tpr1g0308 294 PANTHER ENDONUCLEASE 4 12 294 IPR003154 GO:0003676|GO:0004519|GO:0006308
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Tpr1g0308 Tpr-Chr1 2641264 2643641 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0308 1 2641264 2643641 Tpr1g0308 1 2641264 2643641 ECH